RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 ZNF430Q9H8G1 570 aaPredicted RBP13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 NDUFS7O75251 213 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 HKR1P10072 659 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 SRD5A1P18405 259 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 ATP6V0CP27449 155 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 MIC13Q5XKP0 118 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 PTPRSQ13332 1948 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF705GA8MUZ8 300 aaPredicted RBP13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 S100A12P80511 92 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 SLC16A13Q7RTY0 426 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 OR4B1Q8NGF8 309 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 IGHV3-66A0A0C4DH42 116 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 DKK1O94907 266 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 C5orf24Q7Z6I8 188 aa13.05□□□□□ -0.32
PPFIA1-222ENST00000532504 DOCK10Q96BY6 2186 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 H3BUX3 64 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 SAA1P0DJI8 122 aaPredicted RBP13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 ST6GAL2Q96JF0 529 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 DKK4Q9UBT3 224 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 CEP350Q5VT06 3117 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 CEP295Q9C0D2 2601 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 CA2P00918 260 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 EBLN2Q6P2I7 272 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 PAXXQ9BUH6 204 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 SAV1Q9H4B6 383 aaPredicted RBP13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 H3BTX0 84 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 FAM157CP0CG43 387 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 GPR183P32249 361 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 NSUN5P1Q3KNT7 163 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 CTDSP1Q9GZU7 261 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 CSPG4Q6UVK1 2322 aa13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 EIF3GO75821 320 aaKnown RBP eCLIP13.04□□□□□ -0.32
PPFIA1-222ENST00000532504 DEDDO75618 318 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 A0A1W2PPQ1 181 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF705FA8MVS1 300 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 PPP5D1E7EU14 171 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF705DP0CH99 300 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF705BP0CI00 300 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 COMPP49747 757 aaPredicted RBP13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ADORA2A-AS1P86434 159 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 HEPN1Q6WQI6 88 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 Q8NA96 180 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 WDR61Q9GZS3 305 aaKnown RBP13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF581Q9P0T4 197 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 RNASEK-C17orf49H0YIS7 233 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 OR2C1O95371 312 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ORM1P02763 201 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 SOD3P08294 240 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 TUSC1Q2TAM9 212 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 CLEC19AQ6UXS0 136 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 Q6ZR03 302 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 FAM89BQ8N5H3 189 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF738Q8NE65 137 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 PRORYQ9H606 182 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 IL4P05112 153 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 NPPCP23582 126 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 ATRXP46100 2492 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 LRRC75BQ2VPJ9 315 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 TMEM42Q69YG0 159 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 CLDND2Q8NHS1 167 aa13.03□□□□□ -0.32
PPFIA1-222ENST00000532504 MSMBP08118 114 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 SELENOTP62341 195 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 ZNF429Q86V71 674 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 NRGNQ92686 78 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 A0A0G2JLM5 398 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 C11orf94C9JXX5 98 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 NDUFS8O00217 210 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 PAGE4O60829 102 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 WNT2P09544 360 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 HS3ST6Q96QI5 342 aa13.02□□□□□ -0.32
PPFIA1-222ENST00000532504 ANKHD1Q8IWZ3 2542 aaKnown RBP13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 PCDH15Q96QU1 1955 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 C7orf66A4D0T2 115 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 KHDC3LQ587J8 217 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 IL22RA2Q969J5 263 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 FOXA2Q9Y261 457 aaPredicted RBP13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 PLXNB3Q9ULL4 1909 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 TRAV20A0A0B4J274 112 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 BTF3L4Q96K17 158 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 DMRTA2Q96SC8 542 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 PLSCR2Q9NRY7 297 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 MYO18BQ8IUG5 2567 aa13.02□□□□□ -0.33
PPFIA1-222ENST00000532504 HIST1H1EP10412 219 aaKnown RBP13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 AARDQ4LEZ3 155 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 HSD17B13Q7Z5P4 300 aaPredicted RBP13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 DMRTC2Q8IXT2 367 aaPredicted RBP13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 SLC2A8Q9NY64 477 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 TRAV30A0A087WSZ9 112 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 FAM90A26D6RGX4 464 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 PITX3O75364 302 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 RELQ04864 619 aaPredicted RBP13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 NPFFO15130 113 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 SUMO1P63165 101 aaKnown RBP13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 OR5AU1Q8NGC0 362 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 WNT10AQ9GZT5 417 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 FBLN5Q9UBX5 448 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 M0QZK8 103 aa13.01□□□□□ -0.33
PPFIA1-222ENST00000532504 RAMP3O60896 148 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms