RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 SPATA2Q9UM82 520 aa4.58□□□□□ -1.68
HMGB1P42-201ENST00000532126 DSCAML1Q8TD84 2053 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 TRBV6-7A0A0A0MS04 114 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 A0A0A6YYH2 397 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 IGKV1-6A0A0C4DH72 117 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 GAGE12JA6NER3 117 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 TMEM235A6NFC5 223 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 A6NJ64 397 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 NCBP2LA6PVI3 153 aaKnown RBP4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF736B4DX44 427 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ITGB1BP1O14713 200 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 BET1O15155 118 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 FGF16O43320 207 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 GABARAPO95166 117 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 MBP02144 154 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 TFAP2AP05549 437 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 HTR2BP41595 481 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 LINC00310P59036 64 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 RAB11AP62491 216 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 EBI3Q14213 229 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF260Q3ZCT1 412 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 RPL39P5Q59GN2 51 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 UBE2NLQ5JXB2 153 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 GPR107Q5VW38 600 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM71F2Q6NXP2 309 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q6ZS49 121 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF833PQ6ZTB9 187 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q75L30 129 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q8N6K4 173 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 C5orf56Q8N8D9 126 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 SAMD12Q8N8I0 201 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 LRRC20Q8TCA0 184 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 CD300LFQ8TDQ1 290 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 NUDCD2Q8WVJ2 157 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 SLC25A46Q96AG3 418 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 S100A16Q96FQ6 103 aaKnown RBP4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ABHD14BQ96IU4 210 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 GINS4Q9BRT9 223 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 AGMATQ9BSE5 352 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 MRPL20Q9BYC9 149 aaKnown RBP4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 DCSTAMPQ9H295 470 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 C5orf66Q9H5L9 145 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF221Q9UK13 617 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 ELF5Q9UKW6 265 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 TBC1D24Q9ULP9 559 aa4.57□□□□□ -1.68
HMGB1P42-201ENST00000532126 IGKV1D-8A0A087WSZ0 117 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 CTXN2P0C2S0 81 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR8U9P0C7N5 309 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 CT45A6P0DMU7 189 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 CT45A5P0DMU8 189 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 CT45A7P0DMV0 189 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 ALDH3B2P48448 385 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 RORCP51449 518 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF415Q09FC8 603 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 OPCMLQ14982 345 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 MMDQ15546 238 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 TMEM69Q5SWH9 247 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR8U1Q8NH10 309 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 ACOT12Q8WYK0 555 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 AP3S1Q92572 193 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 RASL11BQ9BPW5 248 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 NABP2Q9BQ15 211 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 ZNF251Q9BRH9 671 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 CABLES2Q9BTV7 478 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 NAA50Q9GZZ1 169 aaKnown RBP4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 TOLLIPQ9H0E2 274 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 ABCG5Q9H222 651 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 AAMDCQ9H7C9 122 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 PLSCR3Q9NRY6 295 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 PTTG2Q9NZH5 202 aa4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 RBM7Q9Y580 266 aaKnown RBP4.56□□□□□ -1.68
HMGB1P42-201ENST00000532126 KIAA2026Q5HYC2 2103 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 ANK2Q01484 3957 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 SMIM31A0A1B0GVY4 71 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 A0A1W2PPV4 95 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 OR5H14A6NHG9 310 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 H0YJW9 148 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 H7C2Y5 167 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 M0R1X1 148 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 NBR2O15453 112 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 APOHP02749 345 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 CD28P10747 220 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 NKX2-1P43699 371 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 CBX5P45973 191 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 RPL5P46777 297 aaKnown RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 TAS2R20P59543 309 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 ARPC4P59998 168 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 ACTBP60709 375 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 MEF2DQ14814 521 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 LINC01620Q4KN68 170 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 CNIH2Q6PI25 160 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 KCNIP4Q6PIL6 250 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 FAM131AQ6UXB0 335 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 COX8CQ7Z4L0 72 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 SLC35E3Q7Z769 313 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 HOGA1Q86XE5 327 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 CLVS1Q8IUQ0 354 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 H1FOOQ8IZA3 346 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 GBGT1Q8N5D6 347 aa4.55□□□□□ -1.68
HMGB1P42-201ENST00000532126 Q8N9W7 124 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms