RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 ZNF257Q9Y2Q1 563 aa13.84□□□□□ -0.19
VPS26B-206ENST00000531741 ARL14EPLP0DKL9 152 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 RPL29P47914 159 aaKnown RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 ARSJQ5FYB0 599 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 CST9LP1Q5W188 147 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 KCNIP4Q6PIL6 250 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 TEPPQ6URK8 271 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 SLC25A48Q6ZT89 311 aaKnown RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 LYG1Q8N1E2 194 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 OR2T10Q8NGZ9 312 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 ENY2Q9NPA8 101 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 RPUSD1Q9UJJ7 312 aaKnown RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 ATP5IP56385 69 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 RAB31Q13636 194 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 DUX4L9Q6RFH8 374 aaPredicted RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 CISD2Q8N5K1 135 aaKnown RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 ZCCHC14Q8WYQ9 949 aaKnown RBP13.83□□□□□ -0.2
VPS26B-206ENST00000531741 TMEM204Q9BSN7 226 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 ELOVL1Q9BW60 279 aa13.83□□□□□ -0.2
VPS26B-206ENST00000531741 LOC400499M0QZD8 3231 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 CADP27708 2225 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 NEUROG1Q92886 237 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 ACY3Q96HD9 319 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 PCGF1Q9BSM1 259 aa13.82□□□□□ -0.2
VPS26B-206ENST00000531741 SVILO95425 2214 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 NDUFB4O95168 129 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 HIST1H1BP16401 226 aaKnown RBP13.81□□□□□ -0.2
VPS26B-206ENST00000531741 UBE2G2P60604 165 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 RHOBP62745 196 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 CCL13Q99616 98 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 HIST1H2BLQ99880 126 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 PRRC2CQ9Y520 2896 aaKnown RBP13.81□□□□□ -0.2
VPS26B-206ENST00000531741 RAI1Q7Z5J4 1906 aaPredicted RBP13.81□□□□□ -0.2
VPS26B-206ENST00000531741 ZNF318Q5VUA4 2279 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 A0A1W2PPQ1 181 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 CA2P00918 260 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 IRF2P14316 349 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 FABP4P15090 132 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 PDLIM4P50479 330 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 PRCDQ00LT1 54 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 ACTL10Q5JWF8 245 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 C22orf34Q6ZV56 151 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 OR51B2Q9Y5P1 312 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 LINC00312Q9Y6C7 94 aa13.81□□□□□ -0.2
VPS26B-206ENST00000531741 hADV38S2A0JD32 116 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 UPK2O00526 184 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 CCKARP32238 428 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PRR20EP86478 221 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PRR20CP86479 221 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PRR20DP86480 221 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PRR20BP86481 221 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PRR20AP86496 221 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 FOXL1Q12952 345 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 EFNB3Q15768 340 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 RTL8BQ17RB0 113 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 PDZD11Q5EBL8 140 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 FAM216BQ8N7L0 139 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 STPG3Q8N7X2 389 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 RNASEH2CQ8TDP1 164 aaKnown RBP13.8□□□□□ -0.2
VPS26B-206ENST00000531741 ARL2-SNX15V9GYD0 113 aa13.8□□□□□ -0.2
VPS26B-206ENST00000531741 CT45A6P0DMU7 189 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 CT45A5P0DMU8 189 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 CT45A7P0DMV0 189 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 GCHFRP30047 84 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 TMEM108Q6UXF1 575 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 TMEM144Q7Z5S9 345 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 DEFB108BQ8NET1 73 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 OR1P1Q8NH06 330 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 PACRGQ96M98 296 aaPredicted RBP13.79□□□□□ -0.2
VPS26B-206ENST00000531741 PFDN5Q99471 154 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 MT-CO2P00403 227 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 TNFRSF1AP19438 455 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 MEF2CQ06413 473 aaPredicted RBP13.79□□□□□ -0.2
VPS26B-206ENST00000531741 DERL1Q9BUN8 251 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 FKBP11Q9NYL4 201 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 ELOVL5Q9NYP7 299 aa13.79□□□□□ -0.2
VPS26B-206ENST00000531741 NKX6-3A6NJ46 265 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 J3QR06 171 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 K7EM74 188 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 MMP23AO75900 390 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 BMP5P22003 454 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 ZNF833PQ6ZTB9 187 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SSMEM1Q8WWF3 244 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 C11orf52Q96A22 123 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 PLEKHA3Q9HB20 300 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SLC35D1Q9NTN3 355 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 BET1LQ9NYM9 111 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 DYSFO75923 2080 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 EP300Q09472 2414 aaPredicted RBP13.78□□□□□ -0.2
VPS26B-206ENST00000531741 CHRNA7P36544 502 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 GNG10P50151 68 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SSX8Q7RTT4 187 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 OR5B3Q8NH48 314 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SFRP2Q96HF1 295 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 GAL3ST2Q9H3Q3 398 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 PRDM13Q9H4Q3 707 aa13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SEPSECSQ9HD40 501 aaKnown RBP13.78□□□□□ -0.2
VPS26B-206ENST00000531741 SLC25A10Q9UBX3 287 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms