RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 IAH1Q2TAA2 248 aaPredicted RBP2.31□□□□□ -2.04
USP47-211ENST00000531513 SMARCD3Q6STE5 483 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 Q6ZS49 121 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 C2orf91Q6ZV80 131 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 TBC1D19Q8N5T2 526 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 ANKRD29Q8N6D5 301 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 TSPAN32Q96QS1 320 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 KLF6Q99612 283 aaPredicted RBP2.31□□□□□ -2.04
USP47-211ENST00000531513 ARMC1Q9NVT9 282 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 MRPL16Q9NX20 251 aaKnown RBP2.31□□□□□ -2.04
USP47-211ENST00000531513 MCTS1Q9ULC4 181 aaKnown RBP2.31□□□□□ -2.04
USP47-211ENST00000531513 NUP155O75694 1391 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 TRIOBPQ9H2D6 2365 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 HECW2Q9P2P5 1572 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 SHANK3Q9BYB0 1731 aa2.31□□□□□ -2.04
USP47-211ENST00000531513 IGHV3-15A0A0B4J1V0 119 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 IGKV2-24A0A0C4DH68 120 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 A0A0J9YY10 115 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 A0A1B0GV72 72 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 A0A1B0GX78 115 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 A0A1W2PNM2 257 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 GNG14A0A1W2PPG7 69 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 KLRC4O43908 158 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 IGLV6-57P01721 117 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 SRP19P09132 144 aaKnown RBP2.3□□□□□ -2.04
USP47-211ENST00000531513 CPMP14384 443 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 RAB13P51153 203 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 TFAMQ00059 246 aaKnown RBP2.3□□□□□ -2.04
USP47-211ENST00000531513 ALX1Q15699 326 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 TEX36Q5VZQ5 186 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 SSX8Q7RTT4 187 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 SLC35F6Q8N357 371 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 OR13C8Q8NGS7 320 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 ZHX1-C8orf76Q96EF9 292 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 TVP23CQ96ET8 276 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 ERMAPQ96PL5 475 aaPredicted RBP2.3□□□□□ -2.04
USP47-211ENST00000531513 PKMYT1Q99640 499 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 MIEN1Q9BRT3 115 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 COMMD5Q9GZQ3 224 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 C19orf12Q9NSK7 152 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 TXNL4BQ9NX01 149 aaKnown RBP2.3□□□□□ -2.04
USP47-211ENST00000531513 NACADO15069 1562 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 SEC16AO15027 2179 aa2.3□□□□□ -2.04
USP47-211ENST00000531513 NUP160Q12769 1436 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 TRBV20OR9-2A0A075B6H5 130 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 hADV38S2A0JD32 116 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 VPS37CA5D8V6 355 aaPredicted RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 FAM159BA6NKW6 160 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 PDE6DO43924 150 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 NPYP01303 97 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 SERPINA7P05543 415 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 CYBAP13498 195 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 XCL1P47992 114 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 RPS20P60866 119 aaKnown RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 MOGQ16653 247 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 OOSP2Q86WS3 158 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 OR51A2Q8NGJ7 313 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 MRPL30Q8TCC3 161 aaKnown RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 DDA1Q9BW61 102 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 WDR61Q9GZS3 305 aaKnown RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 PCBD2Q9H0N5 130 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 C14orf105Q9NVL8 296 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 FAM32AQ9Y421 112 aaKnown RBP2.29□□□□□ -2.04
USP47-211ENST00000531513 HSPE1-MOB4S4R3N1 261 aa2.29□□□□□ -2.04
USP47-211ENST00000531513 ROBO3Q96MS0 1386 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 PRR14LQ5THK1 2151 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 TMEM269A0A1B0GVZ9 245 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 G3V3Q6 166 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 H3BPC8 53 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 I3L521 148 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 CRYZL1O95825 349 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 IFNA1P01562 189 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 ZNF705DP0CH99 300 aaPredicted RBP2.28□□□□□ -2.04
USP47-211ENST00000531513 GZMBP10144 247 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 CBR1P16152 277 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 BLVRBP30043 206 aaPredicted RBP2.28□□□□□ -2.04
USP47-211ENST00000531513 TCTAP57738 103 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 RPL30P62888 115 aaKnown RBP2.28□□□□□ -2.04
USP47-211ENST00000531513 TSNQ15631 228 aaKnown RBP2.28□□□□□ -2.04
USP47-211ENST00000531513 ARHGAP11BQ3KRB8 267 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 LYPD1Q8N2G4 141 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 ZNF283Q8N7M2 679 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 OR52L1Q8NGH7 329 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 OR5C1Q8NGR4 320 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 ZNF675Q8TD23 568 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 TTTY13Q9BZ97 58 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 ENY2Q9NPA8 101 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 BIN3Q9NQY0 253 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 C8orf4Q9NR00 106 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 CISHQ9NSE2 258 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 OPTCQ9UBM4 332 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 RSL24D1Q9UHA3 163 aaKnown RBP2.28□□□□□ -2.04
USP47-211ENST00000531513 SMPXQ9UHP9 88 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 CACNA1SQ13698 1873 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 NLRC5Q86WI3 1866 aa2.28□□□□□ -2.04
USP47-211ENST00000531513 DSCAMO60469 2012 aa2.27□□□□□ -2.05
USP47-211ENST00000531513 LCTP09848 1927 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms