RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 RD3Q7Z3Z2 195 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 SH2D6Q7Z4S9 175 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 SFTPA1Q8IWL2 248 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 DDB2Q92466 427 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 H1FXQ92522 213 aaKnown RBP6.48□□□□□ -1.37
PTPRK-219ENST00000531050 RAB1CQ92928 201 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 C11orf52Q96A22 123 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 HARBI1Q96MB7 349 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 NDFIP1Q9BT67 221 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 B4GALT7Q9UBV7 327 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 C19orf25Q9UFG5 118 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-219ENST00000531050 UFC1Q9Y3C8 167 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 LINC00312Q9Y6C7 94 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 R4GN57 208 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 TRGV10A0A0A0MS01 117 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 LRRC30A6NM36 301 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 PMS2P5A8MQ11 134 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 RER1O15258 196 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 PDCD6O75340 191 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 SPINK8P0C7L1 97 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 FUT7Q11130 342 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 SRSF6Q13247 344 aaKnown RBP6.48□□□□□ -1.37
PTPRK-219ENST00000531050 CEACAM16Q2WEN9 425 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 SLC25A47Q6Q0C1 308 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 DHRS13Q6UX07 377 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 Q6ZS49 121 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 GCSAMQ8N6F7 178 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 OR10X1Q8NGY0 326 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 WIPF2Q8TF74 440 aaPredicted RBP6.48□□□□□ -1.37
PTPRK-219ENST00000531050 LRRC29Q8WV35 223 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 VGLL1Q99990 258 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 CDIP1Q9H305 208 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 METTL7AQ9H8H3 244 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 IL23AQ9NPF7 189 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 TMEM140Q9NV12 185 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 HSPB8Q9UJY1 196 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 PDE4DIPQ5VU43 2346 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 CACNA1IQ9P0X4 2223 aa6.48□□□□□ -1.37
PTPRK-219ENST00000531050 IGKV1-27A0A075B6S5 117 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 TMED7-TICAM2A0A0A6YYA0 188 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 MT-ATP8P03928 68 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 ARL14EPLP0DKL9 152 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 DAZAP2Q15038 168 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-219ENST00000531050 FAM69BQ5VUD6 431 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 TTC9CQ8N5M4 171 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 OR51H1Q8NH63 302 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 FLVCR1-AS1Q8TAF5 88 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 PP6455Q8WZ26 134 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 OSTCQ9NRP0 149 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 MBNL3Q9NUK0 354 aaKnown RBP6.47□□□□□ -1.37
PTPRK-219ENST00000531050 PIGLQ9Y2B2 252 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 ATP23Q9Y6H3 246 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 IGKV1-12A0A0C4DH73 117 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 IZUMO1RA6ND01 250 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 OTOL1A6NHN0 477 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-219ENST00000531050 KLF7O75840 302 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-219ENST00000531050 DHRS3O75911 302 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 IGKV1D-12P01611 117 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 IGHV3-7P01780 117 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 SCTP09683 121 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 OR9G9P0C7N8 305 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 CDAP32320 146 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 CFHR2P36980 270 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 P2RY2P41231 377 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 PRR31Q5SQ13 230 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 TIMM23BQ5SRD1 257 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 OR52E5Q8NH55 327 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 GRAMD2BQ96HH9 432 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 C20orf78Q9BR46 151 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 ZNF331Q9NQX6 463 aaPredicted RBP6.47□□□□□ -1.37
PTPRK-219ENST00000531050 YAE1D1Q9NRH1 226 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 SPAG17Q6Q759 2223 aa6.47□□□□□ -1.37
PTPRK-219ENST00000531050 PRR33A8MZF0 331 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 C21orf140B9A014 251 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 F8W1H4 67 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 H0YGG7 62 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 OR2J3O76001 311 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 LEPROTL1O95214 131 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 CLPSP04118 112 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 ARL3P36405 182 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 MFAP5Q13361 173 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 RSPO4Q2I0M5 234 aaPredicted RBP6.46□□□□□ -1.37
PTPRK-219ENST00000531050 ETDBQ3ZM63 59 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 CENPWQ5EE01 88 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 SSX8Q7RTT4 187 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 ARPC1AQ92747 370 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 EMC6Q9BV81 110 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 GGTLC1Q9BX51 225 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 PRDM6Q9NQX0 595 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 DEC1Q9P2X7 70 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 MYO7BQ6PIF6 2116 aa6.46□□□□□ -1.37
PTPRK-219ENST00000531050 IGKV1-6A0A0C4DH72 117 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 hCG_38984A0A1B0GV85 526 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 PRR19A6NJB7 356 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 PF4V1P10720 104 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 GP1BBP13224 206 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 ATP5J2P56134 94 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 RPS16P62249 146 aaKnown RBP6.46□□□□□ -1.38
PTPRK-219ENST00000531050 MALLQ13021 153 aa6.46□□□□□ -1.38
PTPRK-219ENST00000531050 LINC01545Q5VT33 79 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms