RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 ZNF585BQ52M93 769 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 SLC35E4Q6ICL7 350 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 Q6ZWC4 215 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 FAM57AQ8TBR7 257 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 OR2V2Q96R30 315 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 MANBALQ9NQG1 85 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 SLC45A2Q9UMX9 530 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 OOEPA6NGQ2 149 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 MMP23AO75900 390 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 IGHV3-13P01766 116 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 IGHV3-7P01780 117 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 IL3RAP26951 378 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 PSMB3P49720 205 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 ZNF816Q0VGE8 651 aaPredicted RBP9.61□□□□□ -0.87
USP35-207ENST00000530546 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 PARLQ9H300 379 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 RNF115Q9Y4L5 304 aa9.61□□□□□ -0.87
USP35-207ENST00000530546 NDUFB8O95169 186 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 TIMP3P35625 211 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 LINC00205P59089 165 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 ETFRF1Q6IPR1 90 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 SLC24A4Q8NFF2 622 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 RPUSD4Q96CM3 377 aaKnown RBP9.6□□□□□ -0.87
USP35-207ENST00000530546 TUBG2Q9NRH3 451 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 LIN7CQ9NUP9 197 aaKnown RBP9.6□□□□□ -0.87
USP35-207ENST00000530546 PCNX1Q96RV3 2341 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 RAMP3O60896 148 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 GYPAP02724 150 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 OR5G3P0C626 314 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 PAX9P55771 341 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 RPL30P62888 115 aaKnown RBP9.6□□□□□ -0.87
USP35-207ENST00000530546 CLEC12BQ2HXU8 276 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 TMEM144Q7Z5S9 345 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 ITLN1Q8WWA0 313 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 ALKBH7Q9BT30 221 aaPredicted RBP9.6□□□□□ -0.87
USP35-207ENST00000530546 RSG1Q9BU20 258 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 PARD6GQ9BYG4 376 aaPredicted RBP9.6□□□□□ -0.87
USP35-207ENST00000530546 PIGBOS1A0A0B4J2F0 54 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 NUPR1O60356 82 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 KRTCAP3Q53RY4 240 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 OR8G2PQ6IF36 304 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 C5orf30Q96GV9 206 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 RAB40CQ96S21 281 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 SFXN3Q9BWM7 321 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 VSIRQ9H7M9 311 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 UQCR10Q9UDW1 63 aa9.6□□□□□ -0.87
USP35-207ENST00000530546 ZGRF1Q86YA3 2104 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 DCHS1Q96JQ0 3298 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 ROS1P08922 2347 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 KRASP01116 189 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 CEACAM8P31997 349 aaPredicted RBP9.59□□□□□ -0.87
USP35-207ENST00000530546 GLRXP35754 106 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 EDDM3BP56851 147 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 MZT1Q08AG7 82 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 FOXL1Q12952 345 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 DOLPP1Q86YN1 238 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 GCSAMQ8N6F7 178 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 ZNRF1Q8ND25 227 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 LHX4Q969G2 390 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 SCNM1Q9BWG6 230 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 PSG11Q9UQ72 335 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 IGKV1D-17A0A075B6S4 117 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 A0A0U1RQK1 487 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 ZNF320A2RRD8 509 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 C1QTNF9BB2RNN3 333 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 PRRG2O14669 202 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 MMDQ15546 238 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 MORN2Q502X0 79 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 WFDC8Q8IUA0 241 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 ZNF645Q8N7E2 425 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 FAM169BQ8N8A8 192 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 DEFB108BQ8NET1 73 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 PRR7Q8TB68 274 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 CUL9Q8IWT3 2517 aa9.59□□□□□ -0.87
USP35-207ENST00000530546 PLCE1Q9P212 2302 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 HSBP1L1C9JCN9 74 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 G6PCP35575 357 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
USP35-207ENST00000530546 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
USP35-207ENST00000530546 LINC01551Q86U37 167 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 SPACA3Q8IXA5 215 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 FGFRL1Q8N441 504 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 STPG4Q8N801 248 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 OR5AU1Q8NGC0 362 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 VN1R17PQ8TDU5 208 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 SLC39A9Q9NUM3 307 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 A0A0G2JNJ9 132 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 SRRM5B3KS81 715 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 LRRC75BQ2VPJ9 315 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 FAM78BQ5VT40 261 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 GFRALQ6UXV0 394 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 ZNF295-AS1Q8N0V1 137 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 ZNF738Q8NE65 137 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 RNF2Q99496 336 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 HSPB9Q9BQS6 159 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 Q9UFV3 132 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 LAMTOR2Q9Y2Q5 125 aa9.58□□□□□ -0.88
USP35-207ENST00000530546 RNF212BA8MTL3 300 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 C17orf98A8MV24 154 aa9.57□□□□□ -0.88
USP35-207ENST00000530546 KIAA1324LA8MWY0 1029 aaPredicted RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms