RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 TNXAQ16473 311 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 C10orf55Q5SWW7 151 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 OR10K2Q6IF99 312 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FAM71F2Q6NXP2 309 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 C6orf201Q7Z4U5 140 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 SYS1Q8N2H4 156 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ZFP41Q8N8Y5 198 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ADAD2Q8NCV1 583 aaKnown RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 DGCR14Q96DF8 476 aaKnown RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM80Q96HE8 168 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 HDHD3Q9BSH5 251 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 FAAP24Q9BTP7 215 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 C11orf54Q9H0W9 315 aaPredicted RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ERVK13-1Q9NX77 482 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 ABRACLQ9P1F3 81 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 OAZ3Q9UMX2 235 aa2.62□□□□□ -1.99
PTPRC-213ENST00000529828 EXOGQ9Y2C4 368 aaKnown RBP2.62□□□□□ -1.99
PTPRC-213ENST00000529828 PNMA8CA0A1B0GUJ8 204 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 A0A1B0GVY2 172 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 CBY3A6NI87 242 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 GYG2O15488 501 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 NUPL2O15504 423 aaKnown RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 AIREO43918 545 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 WBP4O75554 376 aaKnown RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 S1PR2O95136 353 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 GHRHP01286 108 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 APOA2P02652 100 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 OR9G9P0C7N8 305 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 MED14OSP0DP75 135 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 IGFBP3P17936 291 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 PSMB6P28072 239 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 CEACAM6P40199 344 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 MEOX2P50222 304 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 ATP5G2Q06055 141 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 TBCEQ15813 527 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 MRGPRG-AS1Q2M3A8 158 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 SPANXN2Q5MJ10 180 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 OR2G6Q5TZ20 316 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF57Q68EA5 555 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 SSX9Q7RTT3 188 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 ZNF575Q86XF7 245 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 OR52I1Q8NGK6 324 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 OR10J5Q8NHC4 309 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 ACOT12Q8WYK0 555 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 MRPL48Q96GC5 212 aaKnown RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 Q96M66 194 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 HARBI1Q96MB7 349 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 OR14A2Q96R54 314 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 PARD6GQ9BYG4 376 aaPredicted RBP2.61□□□□□ -1.99
PTPRC-213ENST00000529828 VCX2Q9H322 139 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 MGAT4CQ9UBM8 478 aa2.61□□□□□ -1.99
PTPRC-213ENST00000529828 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 IGHV3-35A0A0C4DH35 117 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 TMEM213A2RRL7 107 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SRRM4A7MD48 611 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 FAM25AB3EWG3 89 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 FAM25CB3EWG5 89 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 FAM25GB3EWG6 89 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 IGLL5B9A064 214 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 CA11O75493 328 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 LALBAP00709 142 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 CRYGBP07316 175 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 LINC00614P0C842 121 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 LIMS3P0CW19 117 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 LIMS4P0CW20 117 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SMIM6P0DI80 62 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 CBLN1P23435 193 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 DTYMKP23919 212 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 FASP25445 335 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 APOC4P55056 127 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SNRPGP62308 76 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 RBMS2Q15434 407 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 C15orf32Q32M92 178 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SLC25A30Q5SVS4 291 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 GPR107Q5VW38 600 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 PDPNQ86YL7 162 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 UXS1Q8NBZ7 420 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 OR1L6Q8NGR2 347 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 OR5B3Q8NH48 314 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SRSF12Q8WXF0 261 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 RNF183Q96D59 192 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 RNF125Q96EQ8 232 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 C5orf30Q96GV9 206 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 AGMATQ9BSE5 352 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 NICN1Q9BSH3 213 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 OR51M1Q9H341 326 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 TECRQ9NZ01 308 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 NAGKQ9UJ70 344 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 A0A1W2PPQ1 181 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 FAM223BA6NKX1 122 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 M0R2N4 97 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 EI24O14681 340 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 GGCTO75223 188 aaKnown RBP2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SCTP09683 121 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 HTR2CP28335 458 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 RCVRNP35243 200 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 AP3S2P59780 193 aa2.6□□□□□ -1.99
PTPRC-213ENST00000529828 SUMO1P63165 101 aaKnown RBP2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms