RNA–Protein interactions for RNA: ENST00000529689.5

CCDC90B-214, Transcript of coiled-coil domain containing 90B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC90B, Length 4,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-214ENST00000529689 Q56UQ5 140 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 LRRC10Q5BKY1 277 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 CYP2G1PQ6ZSU1 146 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 NOL4LQ96MY1 436 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 MS4A5Q9H3V2 200 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 C20orf202A1L168 122 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 RAB29O14966 203 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM183BQ1AE95 376 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM108Q6UXF1 575 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 PSMG3Q9BT73 122 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 GNB4Q9HAV0 340 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 CSPG4Q6UVK1 2322 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 NCBP2LA6PVI3 153 aaKnown RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 SLC31A2O15432 143 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 IL18BPO95998 194 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 PLA2G5P39877 138 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 GABRA6Q16445 453 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 ARSJQ5FYB0 599 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 PEAR1Q5VY43 1037 aaPredicted RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 ACP7Q6ZNF0 438 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 FAM216BQ8N7L0 139 aa8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 MRPL18Q9H0U6 180 aaKnown RBP8.32□□□□□ -1.08
CCDC90B-214ENST00000529689 ZNF106Q9H2Y7 1883 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 FAM90A27PA6NNH2 459 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 LINC00869P0C866 280 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 IL3RAP26951 378 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 GFRA1P56159 465 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 FAM27E3Q08E93 113 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 FOXF2Q12947 444 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM42Q69YG0 159 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM45BQ96B21 275 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 CA2P00918 260 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 LYL1P12980 280 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 MYOD1P15172 320 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 IGFBP2P18065 325 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 CCKARP32238 428 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 VMA21Q3ZAQ7 101 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 LYPD6Q86Y78 171 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 STPG3Q8N7X2 389 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 DDA1Q9BW61 102 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 SEMA5BQ9P283 1151 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 RALYQ9UKM9 306 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 ZNF729A6NN14 1252 aaPredicted RBP8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 DIRC3C9JPN6 131 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 SLC25A17O43808 307 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 RPL11P62913 178 aaKnown RBP8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 KRTCAP3Q53RY4 240 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 MED12LQ86YW9 2145 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 C1QL4Q86Z23 238 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 TGIF2LYQ8IUE0 185 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 HIST1H2BLQ99880 126 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 ONECUT1Q9UBC0 465 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 SPRR3Q9UBC9 169 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 IL19Q9UHD0 177 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 NAGKQ9UJ70 344 aa8.31□□□□□ -1.08
CCDC90B-214ENST00000529689 EML6Q6ZMW3 1958 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 PLXNB1O43157 2135 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 LOC102724200A0A096LPH7 203 aaPredicted RBP8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 A0A1B0GUS0 222 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM250H0YL14 139 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 M0R2Z0 102 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 NTN3O00634 580 aaPredicted RBP8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 CT45A10P0DMU9 189 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 HSPE1P61604 102 aaKnown RBP8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 Q6ZT83 130 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM183AQ8IXX5 376 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 C9orf106Q8NAJ2 232 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 ST6GALNAC3Q8NDV1 305 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 TMEM167BQ9NRX6 74 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 LY6G6EA0A0G2JKS1 128 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 FAM90A26D6RGX4 464 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 NDUFA2O43678 99 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 NUBP1P53384 320 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 ZNF497Q6ZNH5 498 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 RPEQ96AT9 228 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 NABP2Q9BQ15 211 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 U3KQA8 63 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 IGHV3-35A0A0C4DH35 117 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 IL15RAQ13261 267 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 MMD2Q8IY49 270 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 FAM19A2Q8N3H0 131 aa8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 SLC25A10Q9UBX3 287 aaPredicted RBP8.3□□□□□ -1.08
CCDC90B-214ENST00000529689 ANKHD1Q8IWZ3 2542 aaKnown RBP8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 OR9G9P0C7N8 305 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 GCHFRP30047 84 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 RND2P52198 227 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 FOXA3P55318 350 aaPredicted RBP8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 FOXC1Q12948 553 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 PCSK4Q6UW60 755 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 PDPNQ86YL7 162 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 HIST3H2BBQ8N257 126 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 LINC00469Q8N7U9 141 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 GAL3ST2Q9H3Q3 398 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 PRNDQ9UKY0 176 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 TIMM9Q9Y5J7 89 aa8.29□□□□□ -1.08
CCDC90B-214ENST00000529689 DENND4AQ7Z401 1863 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms