RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 MRPL32Q9BYC8 188 aaKnown RBP6.87□□□□□ -1.31
CTNND1-220ENST00000529526 RPS20P60866 119 aaKnown RBP6.87□□□□□ -1.31
CTNND1-220ENST00000529526 TIMM23BQ5SRD1 257 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 GALNT14Q96FL9 552 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 CITED2Q99967 270 aaPredicted RBP6.87□□□□□ -1.31
CTNND1-220ENST00000529526 PSME4Q14997 1843 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 BRWD1Q9NSI6 2320 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 C9JCJ5 164 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 SMAGPQ0VAQ4 97 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 FADS6Q8N9I5 356 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 OR4D5Q8NGN0 318 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 HIST1H2BAQ96A08 127 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 ABHD17AQ96GS6 310 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 TM2D1Q9BX74 207 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 NPIPB13A6NJU9 1138 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 SLC17A3O00476 420 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 UMODP07911 640 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 DNM1P46Q6ZS02 220 aa6.87□□□□□ -1.31
CTNND1-220ENST00000529526 PATJQ8NI35 1801 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 BRCA1P38398 1863 aaKnown RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 SCO2A0A1W2PP80 73 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 GAGE10A6NGK3 116 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 CD8AP01732 235 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 TAS2R60P59551 318 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 MRPL20Q9BYC9 149 aaKnown RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 FOLR2P14207 255 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 GLRXP35754 106 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 LTBRP36941 435 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 MYOFQ9NZM1 2061 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 WNK3Q9BYP7 1800 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 TRBV20OR9-2A0A075B6H5 130 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 A6NJY4 79 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 PRSS2P07478 247 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 GATA2P23769 480 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 PSG7Q13046 419 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 C9orf106Q8NAJ2 232 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 RCC1LQ96I51 464 aaKnown RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 RPRMQ9NS64 109 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 CBLN4Q9NTU7 201 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 PDCD11Q14690 1871 aaKnown RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 ARID1AO14497 2285 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 NPIPB9F8W1W9 429 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 SIAH2O43255 324 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 FABP2P12104 132 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 FOXA3P55318 350 aaPredicted RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 GCSAMLQ5JQS6 135 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 LINC00114Q6XXX2 140 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 C1QTNF5Q9BXJ0 243 aa6.86□□□□□ -1.31
CTNND1-220ENST00000529526 MTCL1Q9Y4B5 1905 aaKnown RBP6.86□□□□□ -1.31
CTNND1-220ENST00000529526 FOXH1O75593 365 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 TBX6O95947 436 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 PMCHL1Q16048 86 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 OR10AG1Q8NH19 301 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 IMMP2LQ96T52 175 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 MESP1Q9BRJ9 268 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 COL25A1Q9BXS0 654 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 IFI27L2Q9H2X8 130 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 UNC13CQ8NB66 2214 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 PF4P02776 101 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 SNRPD3P62318 126 aaKnown RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 CSRP2Q16527 193 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 FAM159AQ6UWV7 190 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 WDYHV1Q96HA8 205 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 ATP5G3P48201 142 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 CD69Q07108 199 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 C1QTNF12Q5T7M4 302 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 TEX45Q8NA69 505 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 PLPPR1Q8TBJ4 325 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 C18orf15Q96N68 181 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 MRPL13Q9BYD1 178 aaKnown RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 FBXL7Q9UJT9 491 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 ZNF256Q9Y2P7 627 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 A0A0B4J293 547 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM262E9PQX1 116 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 CHRNA10Q9GZZ6 450 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 PSMB11A5LHX3 300 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 NPFFO15130 113 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 PPP1R17O96001 155 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 GPR183P32249 361 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 CDKN1AP38936 164 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 HBBP68871 147 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 EFNB1P98172 346 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 ZNF506Q5JVG8 444 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 FAM209BQ5JX69 171 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 CLEC19AQ6UXS0 136 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 MIR17HGQ75NE6 70 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 NUP37Q8NFH4 326 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 LYZL4Q96KX0 146 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 C19orf24Q9BVV8 132 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 BEX4Q9NWD9 120 aaPredicted RBP6.85□□□□□ -1.31
CTNND1-220ENST00000529526 TMEM160Q9NX00 188 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 MOB4Q9Y3A3 225 aa6.85□□□□□ -1.31
CTNND1-220ENST00000529526 KBTBD11-OT1A0A1B0GTJ5 212 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 A0A1W2PRX2 142 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 M0R381 172 aa6.84□□□□□ -1.31
CTNND1-220ENST00000529526 SLC25A34Q6PIV7 304 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms