RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 OR4A47Q6IF82 309 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 HOGA1Q86XE5 327 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 FANCD2OSQ96PS1 177 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 HIPK2Q9H2X6 1198 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 DIABLOQ9NR28 239 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 TECRQ9NZ01 308 aaKnown RBP9.81□□□□□ -0.84
CPSF1-204ENST00000529288 DMRT1Q9Y5R6 373 aa9.81□□□□□ -0.84
CPSF1-204ENST00000529288 RBMY1BA6NDE4 496 aaKnown RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 RBMY1EA6NEQ0 496 aaKnown RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 SCAF4O95104 1147 aaKnown RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 CLEC3BP05452 202 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 RBMY1DP0C7P1 496 aaKnown RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 HIST1H1BP16401 226 aaKnown RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 CBLN1P23435 193 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 CATR1Q13166 79 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 TIMM50Q3ZCQ8 353 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF57Q68EA5 555 aaPredicted RBP9.8□□□□□ -0.84
CPSF1-204ENST00000529288 TMEM17Q86X19 198 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 LAX1Q8IWV1 398 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 DMBX1Q8NFW5 382 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 OR51H1Q8NH63 302 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 SLC25A38Q96DW6 304 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 CCDC140Q96MF4 163 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 AIFM2Q9BRQ8 373 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 ETV7Q9Y603 341 aa9.8□□□□□ -0.84
CPSF1-204ENST00000529288 TRAV3A0A0B4J244 114 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 IGHV3-35A0A0C4DH35 117 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 MFSD2BA6NFX1 497 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 LGALS9O00182 355 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 CRYGCP07315 174 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 CTRB1P17538 263 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 HERV-K104P61576 105 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 TM4SF20Q53R12 229 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 AADACL3Q5VUY0 350 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 CTRB2Q6GPI1 263 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 SLC16A13Q7RTY0 426 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 GPHB5Q86YW7 130 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 UXS1Q8NBZ7 420 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 ZBTB34Q8NCN2 500 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 OR52B4Q8NGK2 314 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 OR4A5Q8NH83 315 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 COMMD5Q9GZQ3 224 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 AUNIPQ9H7T9 357 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 IFT46Q9NQC8 304 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 BET1LQ9NYM9 111 aa9.79□□□□□ -0.84
CPSF1-204ENST00000529288 CGB1A6NKQ9 187 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 UPK2O00526 184 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 HPRT1P00492 218 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 NQO2P16083 231 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 GPR183P32249 361 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 SCAND1P57086 179 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 OR2B8PP59922 312 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF585BQ52M93 769 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 BTNL8Q6UX41 500 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 LINC00322Q6ZN03 302 aaPredicted RBP9.78□□□□□ -0.84
CPSF1-204ENST00000529288 ZNF818PQ6ZRF7 136 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 TMEM61Q8N0U2 210 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 FUNDC2Q9BWH2 189 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 HINT2Q9BX68 163 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 VCX3AQ9NNX9 186 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 EHFQ9NZC4 300 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 MLXQ9UH92 298 aa9.78□□□□□ -0.84
CPSF1-204ENST00000529288 STARD9Q9P2P6 4700 aa9.77□□□□□ -0.84
CPSF1-204ENST00000529288 IGLV11-55A0A075B6I3 123 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 TRBV7-1A0A0A6YYK4 115 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 TMEM213A2RRL7 107 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 S1PR2O95136 353 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 RPS19P39019 145 aaKnown RBP9.77□□□□□ -0.85
CPSF1-204ENST00000529288 CBX5P45973 191 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 TAS2R31P59538 309 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 ERVK-16P61578 105 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 LSM3P62310 102 aaKnown RBP9.77□□□□□ -0.85
CPSF1-204ENST00000529288 MSMO1Q15800 293 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 SLC25A24Q6NUK1 477 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 PLET1Q6UQ28 207 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
CPSF1-204ENST00000529288 OR5AP2Q8NGF4 316 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 OR10W1Q8NGF6 305 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 IL17DQ8TAD2 202 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 TMEM140Q9NV12 185 aa9.77□□□□□ -0.85
CPSF1-204ENST00000529288 A0A0A6YYH2 397 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 IGHV3-21A0A0B4J1V1 117 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 A6NJ64 397 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 JTBO76095 146 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 PMP2P02689 132 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 NCS1P62166 190 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 UNQ9165/PRO28630Q6UXU0 137 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 GIMAP1Q8WWP7 306 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 S100A16Q96FQ6 103 aaKnown RBP9.76□□□□□ -0.85
CPSF1-204ENST00000529288 NAA50Q9GZZ1 169 aaKnown RBP9.76□□□□□ -0.85
CPSF1-204ENST00000529288 THYN1Q9P016 225 aa9.76□□□□□ -0.85
CPSF1-204ENST00000529288 IGLC7A0M8Q6 106 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 CYB5BO43169 146 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 RBFOX2O43251 390 aaKnown RBP eCLIP9.75□□□□□ -0.85
CPSF1-204ENST00000529288 TMEM127O75204 238 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 RLN1P04808 185 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 TRAPPC2P0DI81 140 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 TRAPPC2BP0DI82 140 aa9.75□□□□□ -0.85
CPSF1-204ENST00000529288 OR13C7P0DN81 318 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms