RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 MSMO1Q15800 293 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 UBE2NLQ5JXB2 153 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 MFSD4AQ8N468 514 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 SAMD12Q8N8I0 201 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 BEST4Q8NFU0 473 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 OR52B4Q8NGK2 314 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 WDR89Q96FK6 387 aaPredicted RBP11.77□□□□□ -0.53
CTSB-215ENST00000528965 CXorf58Q96LI9 332 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 CCDC140Q96MF4 163 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 FUNDC2Q9BWH2 189 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 WFDC10AQ9H1F0 79 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 CSMD3Q7Z407 3707 aa11.77□□□□□ -0.53
CTSB-215ENST00000528965 LYSTQ99698 3801 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 IGHV3-23P01764 117 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 AREGP15514 252 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 HLA-GP17693 338 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 CBLN1P23435 193 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 CATR1Q13166 79 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 TMEM69Q5SWH9 247 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 SSX9Q7RTT3 188 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 TMEM61Q8N0U2 210 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 MARC2Q969Z3 335 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 HRASLSQ9HDD0 168 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 BET1LQ9NYM9 111 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 DMRT1Q9Y5R6 373 aa11.76□□□□□ -0.53
CTSB-215ENST00000528965 DNAH1Q9P2D7 4330 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 TMEM213A2RRL7 107 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 CYB5BO43169 146 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 RBFOX2O43251 390 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTSB-215ENST00000528965 NDUFB8O95169 186 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 FCER2P06734 321 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 CTRB1P17538 263 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 EIF4EBP1Q13541 118 aaPredicted RBP11.75□□□□□ -0.53
CTSB-215ENST00000528965 CTRB2Q6GPI1 263 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 C19orf35Q6ZS72 473 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 ZBTB34Q8NCN2 500 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 OR13F1Q8NGS4 319 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 SECTM1Q8WVN6 248 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 CACNG8Q8WXS5 425 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 SLC25A38Q96DW6 304 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 GGTLC1Q9BX51 225 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 AUNIPQ9H7T9 357 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 THYN1Q9P016 225 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 COMMD3Q9UBI1 195 aa11.75□□□□□ -0.53
CTSB-215ENST00000528965 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 TRAV25A0A0B4J276 109 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 XRCC3O43542 346 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 SSX5O60225 188 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 FCGR2CP31995 323 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 VBP1P61758 197 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 KLK9Q2XQG4 91 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 MZT2AQ6P582 158 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 RBPMS2Q6ZRY4 209 aaKnown RBP11.74□□□□□ -0.53
CTSB-215ENST00000528965 HOGA1Q86XE5 327 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 SPAG16Q8N0X2 631 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 GVQW1Q8N7I0 195 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 UXS1Q8NBZ7 420 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 SRSF8Q9BRL6 282 aaKnown RBP11.74□□□□□ -0.53
CTSB-215ENST00000528965 COMMD5Q9GZQ3 224 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 KLK9Q9UKQ9 250 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 UFC1Q9Y3C8 167 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 S4R3C0 116 aa11.74□□□□□ -0.53
CTSB-215ENST00000528965 LOC102724200A0A096LPH7 203 aaPredicted RBP11.73□□□□□ -0.53
CTSB-215ENST00000528965 A0A1B0GW64 132 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 MEIS3P1A6NDR6 274 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 FAM25AB3EWG3 89 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 FAM25CB3EWG5 89 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 FAM25GB3EWG6 89 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 E7EUB6 86 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 TNFSF12O43508 249 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 PPYP01298 95 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 NQO2P16083 231 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 EDN2P20800 178 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 PRSS3P35030 304 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 RORCP51449 518 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 TAS2R31P59538 309 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 NCS1P62166 190 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 THOC7Q6I9Y2 204 aaKnown RBP11.73□□□□□ -0.53
CTSB-215ENST00000528965 BTNL8Q6UX41 500 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 CD300LFQ8TDQ1 290 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 BORCS5Q969J3 196 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 SLC25A46Q96AG3 418 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 MLXQ9UH92 298 aa11.73□□□□□ -0.53
CTSB-215ENST00000528965 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
CTSB-215ENST00000528965 HPRT1P00492 218 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 REG1AP05451 166 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 FGF2P09038 288 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 MYOD1P15172 320 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 GPR183P32249 361 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 ELLP55199 621 aaPredicted RBP11.72□□□□□ -0.53
CTSB-215ENST00000528965 BRWD1-AS2P59051 145 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 FXYD4P59646 89 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 OR2B8PP59922 312 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 HERV-K104P61576 105 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 GPR141Q7Z602 305 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 SLC38A6Q8IZM9 456 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 OR1L6Q8NGR2 347 aa11.72□□□□□ -0.53
CTSB-215ENST00000528965 MRPS26Q9BYN8 205 aaKnown RBP11.72□□□□□ -0.53
CTSB-215ENST00000528965 SLC5A7Q9GZV3 580 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms