RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
TRAPPC4-209ENST00000528230 PRKDCP78527 4128 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 A0A1B0GW64 132 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 CTDSP2O14595 271 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 RGS5O15539 181 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 SAP30O75446 220 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 RBMXL2O75526 392 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 S1PR2O95136 353 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 DHFRP00374 187 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 IFNA6P05013 189 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 HIST1H1BP16401 226 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 PSMB6P28072 239 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 LPAR6P43657 344 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 ERVK-16P61578 105 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 MRPS10P82664 201 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 SSBP1Q04837 148 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 THOC7Q6I9Y2 204 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 SLC38A6Q8IZM9 456 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 ARRDC1Q8N5I2 433 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 DMBX1Q8NFW5 382 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 OR6Q1Q8NGQ2 317 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 OR52I2Q8NH67 350 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 DYNC2LI1Q8TCX1 351 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 FCAMRQ8WWV6 532 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 COMMD5Q9GZQ3 224 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 MIXL1Q9H2W2 232 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 TMEM140Q9NV12 185 aa9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 CCDC59Q9P031 241 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 LSM4Q9Y4Z0 139 aaKnown RBP9.29□□□□□ -0.92
TRAPPC4-209ENST00000528230 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 TRAV3A0A0B4J244 114 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 CGB1A6NKQ9 187 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 MARCH11A6NNE9 402 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 GABARAPH6UMI1 98 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 PRH1P02810 166 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 CTRB1P17538 263 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 PTBP1P26599 531 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 OR2B8PP59922 312 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 ZNF585BQ52M93 769 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 RNASE10Q5GAN6 216 aaKnown RBP9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 CTRB2Q6GPI1 263 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 HSD17B13Q7Z5P4 300 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 LHFPL1Q86WI0 220 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 TMEM229BQ8NBD8 167 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 ZNF486Q96H40 463 aaPredicted RBP9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 FANCD2OSQ96PS1 177 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 PRR25Q96S07 402 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 B9D2Q9BPU9 175 aa9.28□□□□□ -0.92
TRAPPC4-209ENST00000528230 M0QYG6 137 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 CTDSPLO15194 276 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 NOL3O60936 208 aaKnown RBP9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR2J3O76001 311 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 CD74P04233 296 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 AREGP15514 252 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 TAS2R19P59542 299 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 DEFA5Q01523 94 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 EXOSC2Q13868 293 aaKnown RBP9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 RPEL1Q2QD12 228 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 C15orf32Q32M92 178 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 PHLDA2Q53GA4 152 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 TBC1D26Q86UD7 250 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 LAX1Q8IWV1 398 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR9G4Q8NGQ1 327 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 SIGLEC8Q9NYZ4 499 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 FBXL7Q9UJT9 491 aa9.27□□□□□ -0.93
TRAPPC4-209ENST00000528230 TEX50A0A1B0GTY4 177 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 IGLC7A0M8Q6 106 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 SNAPC5O75971 98 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 KRASP01116 189 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 IGLV1-51P01701 117 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 CD3DP04234 171 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 TRAPPC2P0DI81 140 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 TRAPPC2BP0DI82 140 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 DEFA4P12838 97 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 MYOD1P15172 320 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 SYNJ2BPP57105 145 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 RND3P61587 244 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 RNASE12Q5GAN4 147 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR1L8Q8NGR8 309 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 TERB2Q8NHR7 220 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 ISOC1Q96CN7 298 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 DIRAS2Q96HU8 199 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 TSC22D3Q99576 134 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 QTRT1Q9BXR0 403 aaKnown RBP9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 FKBP11Q9NYL4 201 aa9.26□□□□□ -0.93
TRAPPC4-209ENST00000528230 IGLV11-55A0A075B6I3 123 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 H3BMQ9 156 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 BMPR1BO00238 502 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 NDUFB8O95169 186 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 LY86O95711 162 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 RAB3DO95716 219 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 RPA2P15927 270 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 SPNP16150 400 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 G6PCP35575 357 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 CD69Q07108 199 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 STEAP1BQ6NZ63 245 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 IL34Q6ZMJ4 242 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 OR5B3Q8NH48 314 aa9.25□□□□□ -0.93
TRAPPC4-209ENST00000528230 ZFAND1Q8TCF1 268 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms