RNA–Protein interactions for RNA: ENST00000527792.5

LTBP3-209, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-209ENST00000527792 SMCO1Q147U7 214 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 C2orf68Q2NKX9 166 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 NMSQ5H8A3 153 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 NPFFR1Q9GZQ6 430 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 GSKIPQ9P0R6 139 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 PRNDQ9UKY0 176 aa12.2□□□□□ -0.46
LTBP3-209ENST00000527792 A0A1B0GU03 582 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 MPTX1A8MV57 137 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 RNASE1P07998 156 aaKnown RBP12.19□□□□□ -0.46
LTBP3-209ENST00000527792 P0C879 139 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 MYOD1P15172 320 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 HLA-GP17693 338 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 RRAS2P62070 204 aaPredicted RBP12.19□□□□□ -0.46
LTBP3-209ENST00000527792 BLCAPP62952 87 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 FXYD3Q14802 87 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 FCN2Q15485 313 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 IAH1Q2TAA2 248 aaPredicted RBP12.19□□□□□ -0.46
LTBP3-209ENST00000527792 Q6ZRM9 215 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 QTRT1Q9BXR0 403 aaKnown RBP12.19□□□□□ -0.46
LTBP3-209ENST00000527792 COMMD5Q9GZQ3 224 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.19□□□□□ -0.46
LTBP3-209ENST00000527792 FKBP11Q9NYL4 201 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 OR51B2Q9Y5P1 312 aa12.19□□□□□ -0.46
LTBP3-209ENST00000527792 C15orf61A6NNL5 157 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 SCGB1D2O95969 90 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 IFNA17P01571 189 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 HLA-DRB1P01911 266 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 AMY1AP04745 511 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 IL6RP08887 468 aaPredicted RBP12.18□□□□□ -0.46
LTBP3-209ENST00000527792 MAS1LP35410 378 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 CADM3Q8N126 398 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 OR10C1Q96KK4 312 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 C2orf50Q96LR7 162 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 FYTTD1Q96QD9 318 aaKnown RBP12.18□□□□□ -0.46
LTBP3-209ENST00000527792 HSPB9Q9BQS6 159 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 PRSS22Q9GZN4 317 aa12.18□□□□□ -0.46
LTBP3-209ENST00000527792 ST8SIA3O43173 380 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 RPL27AP46776 148 aaKnown RBP12.17□□□□□ -0.46
LTBP3-209ENST00000527792 CX3CL1P78423 397 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 MRGPRG-AS1Q2M3A8 158 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 C10orf55Q5SWW7 151 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 ZNF562Q6V9R5 426 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 SLC35E3Q7Z769 313 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 ZBTB8BQ8NAP8 495 aaPredicted RBP12.17□□□□□ -0.46
LTBP3-209ENST00000527792 OR5M8Q8NGP6 311 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 GRPEL2Q8TAA5 225 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 PARP11Q9NR21 331 aa12.17□□□□□ -0.46
LTBP3-209ENST00000527792 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
LTBP3-209ENST00000527792 IGHV7-81A0A0B4J1V7 117 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 TEX50A0A1B0GTY4 177 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 A0A1B0GVG6 124 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 SLC25A6P12236 298 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 SPINK9Q5DT21 86 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 Q6ZS46 218 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 FOXRED2Q8IWF2 684 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 OR11H7Q8NGC8 314 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 OR1L8Q8NGR8 309 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
LTBP3-209ENST00000527792 ARPC1AQ92747 370 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 FAM103A1Q9BTL3 118 aaKnown RBP12.16□□□□□ -0.46
LTBP3-209ENST00000527792 COA4Q9NYJ1 87 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 SVEP1Q4LDE5 3571 aa12.16□□□□□ -0.46
LTBP3-209ENST00000527792 HMX3A6NHT5 357 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 MSGN1A6NI15 193 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 CEBPZOSA8MTT3 80 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 KCNAB3O43448 404 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 FGF2P09038 288 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 TRAPPC2P0DI81 140 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 TRAPPC2BP0DI82 140 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 CXCL3P19876 107 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
LTBP3-209ENST00000527792 HSPE1P61604 102 aaKnown RBP12.15□□□□□ -0.46
LTBP3-209ENST00000527792 ZNF429Q86V71 674 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 OR5B3Q8NH48 314 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 TAF15Q92804 592 aaKnown RBP eCLIP12.15□□□□□ -0.46
LTBP3-209ENST00000527792 ENY2Q9NPA8 101 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
LTBP3-209ENST00000527792 LINC01548A6NM66 108 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 WRBO00258 174 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 ATP6V0E1O15342 81 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 PITX3O75364 302 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 APELAP0DMC3 54 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 NKX2-1P43699 371 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-209ENST00000527792 HOXA1P49639 335 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-209ENST00000527792 SPCS3P61009 180 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 RPL15P61313 204 aaKnown RBP12.14□□□□□ -0.47
LTBP3-209ENST00000527792 CXorf66Q5JRM2 361 aaPredicted RBP12.14□□□□□ -0.47
LTBP3-209ENST00000527792 MAGT1Q9H0U3 335 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 ZNF702PQ9H963 129 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 PLEKHA3Q9HB20 300 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 CACFD1Q9UGQ2 172 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 LINC00527Q9UJ94 153 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 ZNF257Q9Y2Q1 563 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 ANK2Q01484 3957 aa12.14□□□□□ -0.47
LTBP3-209ENST00000527792 WIPF1O43516 503 aa12.13□□□□□ -0.47
LTBP3-209ENST00000527792 MED6O75586 246 aa12.13□□□□□ -0.47
LTBP3-209ENST00000527792 IGHG2P01859 326 aa12.13□□□□□ -0.47
LTBP3-209ENST00000527792 VDAC2P45880 294 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms