RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ATP5IP56385 69 aaPredicted RBP12.58□□□□□ -0.4
USH1C-207ENST00000527720 BSXQ3C1V8 233 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 ZNF833PQ6ZTB9 187 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 SLC35D1Q9NTN3 355 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 PPIAL4AQ9Y536 164 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 OR51B2Q9Y5P1 312 aa12.58□□□□□ -0.4
USH1C-207ENST00000527720 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 TMEM178BH3BS89 294 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 PDE6DO43924 150 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 YIF1AO95070 293 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 VENTXO95231 258 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 S100A9P06702 114 aaKnown RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 RPL31P62899 125 aaKnown RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 RBPJQ06330 500 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 RPUSD4Q96CM3 377 aaKnown RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 FAM210BQ96KR6 192 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 LRFN3Q9BTN0 628 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 FKBP11Q9NYL4 201 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 PXMP4Q9Y6I8 212 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 K7ENP7 123 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 UPK2O00526 184 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 RPL23P62829 140 aaKnown RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 ADIRFQ15847 76 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 TEPPQ6URK8 271 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 GATAD1Q8WUU5 269 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 SNRNP40Q96DI7 357 aaKnown RBP12.57□□□□□ -0.4
USH1C-207ENST00000527720 ZNF714Q96N38 554 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 BET1LQ9NYM9 111 aa12.57□□□□□ -0.4
USH1C-207ENST00000527720 PRCDQ00LT1 54 aa12.56□□□□□ -0.4
USH1C-207ENST00000527720 RAB31Q13636 194 aa12.56□□□□□ -0.4
USH1C-207ENST00000527720 ASCL5Q7RTU5 278 aa12.56□□□□□ -0.4
USH1C-207ENST00000527720 OSR1Q8TAX0 266 aaPredicted RBP12.56□□□□□ -0.4
USH1C-207ENST00000527720 MUC6Q6W4X9 2439 aa12.56□□□□□ -0.4
USH1C-207ENST00000527720 NBEAQ8NFP9 2946 aa12.56□□□□□ -0.4
USH1C-207ENST00000527720 STAG3L2P0CL84 134 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 STAG3L3P0CL85 134 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 PLA2G5P39877 138 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 S100A12P80511 92 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 FAM71F2Q6NXP2 309 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 C8orf31Q8N9H6 132 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 RND1Q92730 232 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 SH3BGRL2Q9UJC5 107 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 F6UZH7 168 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 J3QR06 171 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 TNFRSF13BO14836 293 aaPredicted RBP12.55□□□□□ -0.4
USH1C-207ENST00000527720 CXorf1O96002 111 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 CA2P00918 260 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 HOXA5P20719 270 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 FOXC1Q12948 553 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 ARSJQ5FYB0 599 aaPredicted RBP12.55□□□□□ -0.4
USH1C-207ENST00000527720 GCSAMLQ5JQS6 135 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 NEUROG1Q92886 237 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 ANAPC16Q96DE5 110 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 PLEKHA3Q9HB20 300 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 TMEM106BQ9NUM4 274 aa12.55□□□□□ -0.4
USH1C-207ENST00000527720 APOA2P02652 100 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 DEFA4P12838 97 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 RPL29P47914 159 aaKnown RBP12.54□□□□□ -0.4
USH1C-207ENST00000527720 MIC13Q5XKP0 118 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 OR5B3Q8NH48 314 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 NANPQ8TBE9 248 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 RNASE6Q93091 150 aaKnown RBP12.54□□□□□ -0.4
USH1C-207ENST00000527720 C1orf159Q96HA4 380 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 WFIKKN1Q96NZ8 548 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 BSNQ9UPA5 3926 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 LAMA5O15230 3695 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 NDUFB3O43676 98 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 B2MP61769 119 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 LRRC10Q5BKY1 277 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 TMEM200BQ69YZ2 307 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 ZCCHC24Q8N2G6 241 aaKnown RBP12.54□□□□□ -0.4
USH1C-207ENST00000527720 ZNF596Q8TC21 504 aa12.54□□□□□ -0.4
USH1C-207ENST00000527720 PATZ1Q9HBE1 687 aaKnown RBP12.54□□□□□ -0.4
USH1C-207ENST00000527720 PCP4L1A6NKN8 68 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 IGKV1-16P04430 117 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 NCMAPQ5T1S8 102 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 SPNS3Q6ZMD2 512 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 C16orf82Q7Z2V1 217 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 LINC00311Q8N616 119 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 VKORC1Q9BQB6 163 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 PYGO2Q9BRQ0 406 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 KAAG1Q9UBP8 84 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 APC2O95996 2303 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 SHISA9B4DS77 424 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BKO60814 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 TRGC2P03986 189 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BJP06899 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 PFN1P07737 140 aaKnown RBP12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BOP23527 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 S100PP25815 95 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BBP33778 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 CDX1P47902 265 aaPredicted RBP12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BDP58876 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 RHOBP62745 196 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST1H2BCP62807 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST2H2BEQ16778 126 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 TMEM177Q53S58 311 aa12.53□□□□□ -0.4
USH1C-207ENST00000527720 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.53□□□□□ -0.4
USH1C-207ENST00000527720 OR5AN1Q8NGI8 311 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms