RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 ZBTB34Q8NCN2 500 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 OR5H6Q8NGV6 325 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 OR4A5Q8NH83 315 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 CCDC140Q96MF4 163 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 Q9H521 79 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 ZC4H2Q9NQZ6 224 aa16.85■□□□□ 0.29
TRAPPC4-208ENST00000527680 LOC100506127A0A0U1RQW1 187 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 SULT1C2O00338 296 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 CLEC3BP05452 202 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 CATR1Q13166 79 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 HOGA1Q86XE5 327 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 UXS1Q8NBZ7 420 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 OR52B4Q8NGK2 314 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 CXorf58Q96LI9 332 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 DIABLOQ9NR28 239 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 BET1LQ9NYM9 111 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 ETV7Q9Y603 341 aa16.84■□□□□ 0.29
TRAPPC4-208ENST00000527680 TRBV7-1A0A0A6YYK4 115 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 JTBO76095 146 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 PPYP01298 95 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 TIMM50Q3ZCQ8 353 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 YTHDF1Q9BYJ9 559 aaKnown RBP16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 COMMD5Q9GZQ3 224 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 RNF167Q9H6Y7 350 aa16.83■□□□□ 0.28
TRAPPC4-208ENST00000527680 SACSQ9NZJ4 4579 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 SCAF4O95104 1147 aaKnown RBP16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 MSMO1Q15800 293 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 ANKRD55Q3KP44 614 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 TMEM61Q8N0U2 210 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 DMBX1Q8NFW5 382 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 RYR2Q92736 4967 aa16.82■□□□□ 0.28
TRAPPC4-208ENST00000527680 TMEM213A2RRL7 107 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 HPRT1P00492 218 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 NQO2P16083 231 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 SCAND1P57086 179 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 TAS2R31P59538 309 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 OR2B8PP59922 312 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 TM4SF20Q53R12 229 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 OR51H1Q8NH63 302 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 THYN1Q9P016 225 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 MLXQ9UH92 298 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 CSMD3Q7Z407 3707 aa16.81■□□□□ 0.28
TRAPPC4-208ENST00000527680 IGLV11-55A0A075B6I3 123 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 A0A0A6YYH2 397 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 TRAV3A0A0B4J244 114 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 IGHV3-35A0A0C4DH35 117 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 MFSD2BA6NFX1 497 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 A6NJ64 397 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 UPK2O00526 184 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 RBFOX2O43251 390 aaKnown RBP eCLIP16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 RPA2P15927 270 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 ZNF585BQ52M93 769 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 PLET1Q6UQ28 207 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 RBPMS2Q6ZRY4 209 aaKnown RBP16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 TMEM17Q86X19 198 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 SLC25A38Q96DW6 304 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 AUNIPQ9H7T9 357 aa16.8■□□□□ 0.28
TRAPPC4-208ENST00000527680 MEIS3P1A6NDR6 274 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 CGB1A6NKQ9 187 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 GPR183P32249 361 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 CBX5P45973 191 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 AADACL3Q5VUY0 350 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 ZNF773Q6PK81 442 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 BTNL8Q6UX41 500 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 OR5AP2Q8NGF4 316 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 CD300LFQ8TDQ1 290 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 GIMAP1Q8WWP7 306 aa16.79■□□□□ 0.28
TRAPPC4-208ENST00000527680 A8MWP6 167 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 CYB5BO43169 146 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 ATP6V1G2O95670 118 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 HERV-K104P61576 105 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 KLK9Q2XQG4 91 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 ZNF818PQ6ZRF7 136 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 IFT46Q9NQC8 304 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 TMEM140Q9NV12 185 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 KLK9Q9UKQ9 250 aa16.78■□□□□ 0.28
TRAPPC4-208ENST00000527680 STARD9Q9P2P6 4700 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 LOC102724200A0A096LPH7 203 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 NEDD8Q15843 81 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 SLC25A24Q6NUK1 477 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 UNQ9165/PRO28630Q6UXU0 137 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 OR10W1Q8NGF6 305 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 BORCS5Q969J3 196 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 MARC2Q969Z3 335 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 GGTLC1Q9BX51 225 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 QTRT1Q9BXR0 403 aaKnown RBP16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 MRPL27Q9P0M9 148 aaKnown RBP16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 UFC1Q9Y3C8 167 aa16.77■□□□□ 0.28
TRAPPC4-208ENST00000527680 IGLC7A0M8Q6 106 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 S1PR2O95136 353 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 PTBP1P26599 531 aaKnown RBP eCLIP16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 ERVK-16P61578 105 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 POU2AF1Q16633 256 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 OR1L6Q8NGR2 347 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 ZNF502Q8TBZ5 544 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 S100A16Q96FQ6 103 aaKnown RBP16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 SRSF8Q9BRL6 282 aaKnown RBP16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 HINT2Q9BX68 163 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 PLEKHA2Q9HB19 425 aa16.76■□□□□ 0.27
TRAPPC4-208ENST00000527680 EHFQ9NZC4 300 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms