RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 OR6M1Q8NGM8 313 aa11.75□□□□□ -0.53
CHMP4A-203ENST00000527154 DPPA5A6NC42 116 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 ZNF705EA8MWA4 302 aaPredicted RBP11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 NDUFA4O00483 81 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 IGLV2-14P01704 120 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 FCGR3AP08637 254 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 GIG44P09565 113 aaPredicted RBP11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 RPL30P62888 115 aaKnown RBP11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 ST3GAL4Q11206 333 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 EIF4EBP1Q13541 118 aaPredicted RBP11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 VN1R17PQ8TDU5 208 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 CYGBQ8WWM9 190 aa11.74□□□□□ -0.53
CHMP4A-203ENST00000527154 IGHV4-28A0A0C4DH34 117 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 EFCAB10A6NFE3 127 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 M0R2N4 97 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 FCGR3BO75015 233 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 FAM90A2PQ658T7 463 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 Q6ZS49 121 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 SSX9Q7RTT3 188 aa11.73□□□□□ -0.53
CHMP4A-203ENST00000527154 IGLC7A0M8Q6 106 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 C15orf62A8K5M9 175 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 F8W735 103 aaPredicted RBP11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 MYL12BO14950 172 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 MIFP14174 115 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 WNT4P56705 351 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 BSCL2Q96G97 398 aaPredicted RBP11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 RNF2Q99496 336 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 GFI1Q99684 422 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 SMPXQ9UHP9 88 aa11.72□□□□□ -0.53
CHMP4A-203ENST00000527154 ELOA3CA0A087WX78 387 aaPredicted RBP11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 MRPS14O60783 128 aaKnown RBP11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 REG1AP05451 166 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 RPA2P15927 270 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 PSMD7P51665 324 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 OR2B8PP59922 312 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 ACSM3Q53FZ2 586 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 SPSB3Q6PJ21 355 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 Q6ZRM9 215 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 KCTD9Q7L273 389 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 SRSF8Q9BRL6 282 aaKnown RBP11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 MRPS7Q9Y2R9 242 aaKnown RBP11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 PRELID3BQ9Y3B1 194 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 X6R8D5 127 aa11.71□□□□□ -0.53
CHMP4A-203ENST00000527154 SLC17A2O00624 439 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 CHEK1O14757 476 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 FGF2P09038 288 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 DEFA4P12838 97 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 RPL8P62917 257 aaKnown RBP11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 P2RY14Q15391 338 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 AHSA2Q719I0 299 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 OR56B1Q8NGI3 324 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 OR4S2Q8NH73 311 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 CHRDL1Q9BU40 450 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 CENPOQ9BU64 300 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 BET1LQ9NYM9 111 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 THYN1Q9P016 225 aa11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 RBMX2Q9Y388 322 aaKnown RBP11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 DMBT1Q9UGM3 2413 aaPredicted RBP11.7□□□□□ -0.54
CHMP4A-203ENST00000527154 AGRNO00468 2067 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 HLA-DQB1P01920 261 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 UCHL1P09936 223 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 HLA-GP17693 338 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 C12orf74Q32Q52 190 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 TMEM41BQ5BJD5 291 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 RBM48Q5RL73 367 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 DHRSXQ8N5I4 330 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 MS4A15Q8N5U1 240 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 OR10C1Q96KK4 312 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 DCUN1D5Q9BTE7 237 aa11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 RBM7Q9Y580 266 aaKnown RBP11.69□□□□□ -0.54
CHMP4A-203ENST00000527154 IGKV1D-8A0A087WSZ0 117 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 IGHV7-4-1A0A0J9YVY3 117 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 OR2T8A6NH00 312 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 NANOGP1Q8N7R0 232 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 GINS4Q9BRT9 223 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 NDUFAF3Q9BU61 184 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 PSORS1C1Q9UIG5 152 aa11.68□□□□□ -0.54
CHMP4A-203ENST00000527154 DEFB131BA0A096LNP1 70 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 MFNGO00587 321 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 DFFBO76075 338 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 SLC22A5O76082 557 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 HSD17B12Q53GQ0 312 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 LIPKQ5VXJ0 399 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 BPIFB6Q8NFQ5 453 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 HSD17B10Q99714 261 aaKnown RBP11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 RHPN1-AS1Q9BWJ2 59 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 SCRT1Q9BWW7 348 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 CELA1Q9UNI1 258 aa11.67□□□□□ -0.54
CHMP4A-203ENST00000527154 C16orf90A8MZG2 172 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 CD36P16671 472 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 POU2AF1Q16633 256 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 TIMM50Q3ZCQ8 353 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 OR2B11Q5JQS5 317 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 SOHLH1Q5JUK2 328 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 LAIR2Q6ISS4 152 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 MORN3Q6PF18 240 aaPredicted RBP11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 C8orf59Q8N0T1 100 aaPredicted RBP11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 GDPD1Q8N9F7 314 aa11.66□□□□□ -0.54
CHMP4A-203ENST00000527154 CSNK1G2-AS1Q8NCQ2 148 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms