RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 TOMM6Q96B49 74 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 C11orf1Q9H5F2 150 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 EFCAB1Q9HAE3 211 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 SPANXA1Q9NS26 97 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 MED29Q9NX70 200 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 MCTS1Q9ULC4 181 aaKnown RBP2.97□□□□□ -1.93
USP47-206ENST00000525367 TONSLQ96HA7 1378 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 PLXNB3Q9ULL4 1909 aa2.97□□□□□ -1.93
USP47-206ENST00000525367 CEP170Q5SW79 1584 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 CRB1P82279 1406 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 IGHV3OR16-8A0A075B7F1 116 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 TRAV40A0A0B4J280 105 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 TMEM269A0A1B0GVZ9 245 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 IFNA10P01566 189 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 ZNF286BP0CG31 522 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 BLVRBP30043 206 aaPredicted RBP2.96□□□□□ -1.94
USP47-206ENST00000525367 KLF3P57682 345 aaPredicted RBP2.96□□□□□ -1.94
USP47-206ENST00000525367 FXYD7P58549 80 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 TAS2R30P59541 319 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 AKR1C1Q04828 323 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 RHEBQ15382 184 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 RPL22L1Q6P5R6 122 aaKnown RBP2.96□□□□□ -1.94
USP47-206ENST00000525367 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 SSX8Q7RTT4 187 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 MALSU1Q96EH3 234 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 C2orf50Q96LR7 162 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 KLK12Q9UKR0 248 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 NACAE9PAV3 2078 aa2.96□□□□□ -1.94
USP47-206ENST00000525367 NACADO15069 1562 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 MIA2Q96PC5 1412 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 YLPM1P49750 1951 aaKnown RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 TRBV19A0A075B6N1 114 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 C17orf51A8MQB3 221 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 C16orf90A8MZG2 172 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 J3QRK9 145 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 LY6HO94772 140 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 IGHV1-69P01742 117 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 APOA2P02652 100 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HMGN1P05114 100 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BOP23527 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 CRHBPP24387 322 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BBP33778 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 G6PCP35575 357 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 LPAR6P43657 344 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BDP58876 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BCP62807 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 CCL20P78556 96 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST2H2BEQ16778 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 LGALS9BQ3B8N2 356 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 TMEM78Q5T7P6 136 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 LYRM7Q5U5X0 104 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 LGALS9CQ6DKI2 356 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 Q6P435 159 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 SDIM1Q6ZPB5 146 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 SPATA12Q7Z6I5 190 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 OSR2Q8N2R0 312 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 C12orf45Q8N5I9 185 aaPredicted RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 OR13C4Q8NGS5 318 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 OR13D1Q8NGV5 346 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BHQ93079 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 RNASE6Q93091 150 aaKnown RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BNQ99877 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 HIST1H2BMQ99879 126 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 ZNF2Q9BSG1 426 aaPredicted RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 UPK3BQ9BT76 320 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 SCRT1Q9BWW7 348 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 C6orf62Q9GZU0 229 aaPredicted RBP2.95□□□□□ -1.94
USP47-206ENST00000525367 CHST6Q9GZX3 395 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 PBOV1Q9GZY1 135 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 SMDT1Q9H4I9 107 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 GINS2Q9Y248 185 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 CYSLTR1Q9Y271 337 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 TIMM22Q9Y584 194 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 SVILO95425 2214 aa2.95□□□□□ -1.94
USP47-206ENST00000525367 PTPRJQ12913 1337 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 IGKV2D-24A0A075B6R9 120 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 IGHV3-73A0A0B4J1V6 119 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 SIGLEC16A6NMB1 481 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 E7EQ34 232 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 UBFD1O14562 309 aaKnown RBP2.94□□□□□ -1.94
USP47-206ENST00000525367 PRM2P04554 102 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 CCL3P10147 92 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 SCGB1A1P11684 91 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 GLRXP35754 106 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 DEFA3P59666 94 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 AP1S1P61966 158 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 RBX1P62877 108 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 SMCO1Q147U7 214 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 ZNF660Q6AZW8 331 aaPredicted RBP2.94□□□□□ -1.94
USP47-206ENST00000525367 STARD4Q96DR4 205 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 IGF2BP2-AS1Q96M15 143 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 LINC00167Q96N53 147 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 LYSMD1Q96S90 227 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 SERPINI1Q99574 410 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 IMUPQ9GZP8 106 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 FUT9Q9Y231 359 aa2.94□□□□□ -1.94
USP47-206ENST00000525367 NID2Q14112 1375 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms