RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 UCP1P25874 307 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 PPIFP30405 207 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 RPL27AP46776 148 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 AKR1C2P52895 323 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TPPP2P59282 170 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TAS2R31P59538 309 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 RPL8P62917 257 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC35B1P78383 322 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CD83Q01151 205 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CFHR3Q02985 330 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM187Q14656 261 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 RBMS2Q15434 407 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ANKRD55Q3KP44 614 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 C19orf54Q5BKX5 351 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM65Q6PI78 240 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 Q6ZRM9 215 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 C8orf86Q6ZUL3 223 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 H2BFWTQ7Z2G1 175 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 LYZL2Q7Z4W2 148 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF695Q8IW36 515 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SGPP2Q8IWX5 399 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 MMD2Q8IY49 270 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SELENOHQ8IZQ5 122 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CENPSQ8N2Z9 138 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SLC35G3Q8N808 338 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 UXS1Q8NBZ7 420 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 KLHL30-AS1Q8NEE0 82 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 OR4X2Q8NGF9 303 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SGMS2Q8NHU3 365 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CD300LFQ8TDQ1 290 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CHPT1Q8WUD6 406 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 BORCS5Q969J3 196 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 GPR146Q96CH1 333 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ZNF486Q96H40 463 aaPredicted RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 SEC22CQ9BRL7 303 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 CCDC32Q9BV29 185 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 WDR12Q9GZL7 423 aaKnown RBP3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 TMEM222Q9H0R3 208 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 C20orf85Q9H1P6 137 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 GNB4Q9HAV0 340 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 ZC4H2Q9NQZ6 224 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 NUDT15Q9NV35 164 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 BET1LQ9NYM9 111 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 COMMD9Q9P000 198 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 OR51B2Q9Y5P1 312 aa3.59□□□□□ -1.83
CHMP4A-202ENST00000524955 A0A0B4J293 547 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 FAM240BA0A1B0GVZ2 78 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 C9orf170A2RU37 121 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 NAP1L6A6NFF2 107 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 MPTX1A8MV57 137 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 ST8SIA3O43173 380 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SNAPC5O75971 98 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 OR2J3O76001 311 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SFT2D2O95562 160 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 CDS2O95674 445 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TRBV12-3P01733 135 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV3-48P01763 117 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHG4P01861 327 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TRGV3P03979 118 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TCRBP04435 133 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4E1P0C645 316 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 OR13C7P0DN81 318 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 PSMB8P28062 276 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 ECI1P42126 302 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 RAB9AP51151 201 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 MECP2P51608 486 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 RPL23AP62750 156 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 WT1-ASQ06250 92 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TMEM267Q0VDI3 215 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 ASAH1Q13510 395 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 KIAA0141Q14154 515 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SURF2Q15527 256 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 C4orf46Q504U0 113 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 CXorf66Q5JRM2 361 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TEX38Q6PEX7 206 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 NRARPQ7Z6K4 114 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SLC25A42Q86VD7 318 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 C1QL4Q86Z23 238 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 MINDY2Q8NBR6 621 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 OR4A16Q8NH70 328 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 VSTM2AQ8TAG5 236 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 RBPMSQ93062 196 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 RRNAD1Q96FB5 475 aaKnown RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TSC22D3Q99576 134 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SLC25A21Q9BQT8 299 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 COMMD5Q9GZQ3 224 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 CACNG5Q9UF02 275 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 FOXA2Q9Y261 457 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 KCNIP3Q9Y2W7 256 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 DMRT1Q9Y5R6 373 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 TSSC4Q9Y5U2 329 aaPredicted RBP3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 C2CD3Q4AC94 2353 aa3.58□□□□□ -1.84
CHMP4A-202ENST00000524955 IGHV4OR15-8A0A075B7B6 117 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 A0A087WW49 117 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 IGLC7A0M8Q6 106 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 C15orf61A6NNL5 157 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 NDUFB8O95169 186 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 IFNA17P01571 189 aa3.57□□□□□ -1.84
CHMP4A-202ENST00000524955 IGLV1-40P01703 118 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms