RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CXXC4Q9H2H0 198 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 SLC25A22Q9H936 323 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 HES4Q9HCC6 221 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 PPP1R3CQ9UQK1 317 aa6.48□□□□□ -1.37
SPIDR-223ENST00000524033 ODAMA1E959 279 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 XKRY2A2RUG3 117 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 LRRC30A6NM36 301 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 C15orf62A8K5M9 175 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 PPP5D1E7EU14 171 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 HS3ST1O14792 307 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 CCKARP32238 428 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 BRWD1-AS2P59051 145 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 RAB4BP61018 213 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 RPL30P62888 115 aaKnown RBP6.47□□□□□ -1.37
SPIDR-223ENST00000524033 SPANXN5Q5MJ07 72 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 FFAR4Q5NUL3 377 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 GCNT2Q8N0V5 402 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 FGFRL1Q8N441 504 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 GBGT1Q8N5D6 347 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 OR2T10Q8NGZ9 312 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 GATAD1Q8WUU5 269 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 BCL2L2Q92843 193 aaPredicted RBP6.47□□□□□ -1.37
SPIDR-223ENST00000524033 RAB1CQ92928 201 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 RPUSD4Q96CM3 377 aaKnown RBP6.47□□□□□ -1.37
SPIDR-223ENST00000524033 OR5B12Q96R08 314 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 JMJD8Q96S16 334 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 NEU1Q99519 415 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 RTL8AQ9BWD3 113 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 KCNIP1Q9NZI2 227 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 KCNS2Q9ULS6 477 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 WDR83OSQ9Y284 106 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 PKDREJQ9NTG1 2253 aa6.47□□□□□ -1.37
SPIDR-223ENST00000524033 TET2Q6N021 2002 aaPredicted RBP6.47□□□□□ -1.37
SPIDR-223ENST00000524033 TRAV39A0A0B4J263 110 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 A8MXE2 369 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 F6UZH7 168 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 SIRPB1O00241 398 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 SOX15O60248 233 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 SYNGR4O95473 234 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 COX5AP20674 150 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 IL3RAP26951 378 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 HCFC1P51610 2035 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 NUTF2P61970 127 aaKnown RBP6.46□□□□□ -1.38
SPIDR-223ENST00000524033 GNB1P62873 340 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 GNB2P62879 340 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 GABRA6Q16445 453 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 C9orf135Q5VTT2 229 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 SLC35E4Q6ICL7 350 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 NUFIP2Q7Z417 695 aaKnown RBP6.46□□□□□ -1.38
SPIDR-223ENST00000524033 MRPL52Q86TS9 123 aaKnown RBP6.46□□□□□ -1.38
SPIDR-223ENST00000524033 CNEP1R1Q8N9A8 125 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 OR10G9Q8NGN4 311 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 OR10G7Q8NGN6 311 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 APH1AQ96BI3 265 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 MBD6Q96DN6 1003 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 BTF3L4Q96K17 158 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 CIB3Q96Q77 187 aaPredicted RBP6.46□□□□□ -1.38
SPIDR-223ENST00000524033 NPCDR1Q9BY65 106 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 POLDIP2Q9Y2S7 368 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 F8P00451 2351 aa6.46□□□□□ -1.38
SPIDR-223ENST00000524033 SPG11Q96JI7 2443 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 TRAV9-1A0A075B6T8 112 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 TMEM30CPA0ZSE6 113 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 IQCF6A8MYZ5 107 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PRSS46E5RG02 174 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PAGE4O60829 102 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 SMPD2O60906 423 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 TNFSF13O75888 250 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 S1PR2O95136 353 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 GOSR1O95249 250 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 RNASE1P07998 156 aaKnown RBP6.45□□□□□ -1.38
SPIDR-223ENST00000524033 SNRPCP09234 159 aaKnown RBP6.45□□□□□ -1.38
SPIDR-223ENST00000524033 ESDP10768 282 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CCNOP22674 350 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CA6P23280 308 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CNN1P51911 297 aaKnown RBP6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PPP1CBP62140 327 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 SELENOTP62341 195 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PAX5Q02548 391 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PLP2Q04941 152 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 FAM27E3Q08E93 113 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 DEFB113Q30KQ7 82 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 PDLIM3Q53GG5 364 aaPredicted RBP6.45□□□□□ -1.38
SPIDR-223ENST00000524033 C1orf194Q5T5A4 169 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 OR8G2PQ6IF36 304 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 ZNF66Q6ZN08 573 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 LINC01551Q86U37 167 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 MDP1Q86V88 176 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 SCCPDHQ8NBX0 429 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 NECAP1Q8NC96 275 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 OR4F5Q8NH21 305 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 OR1L1Q8NH94 360 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 IL1F10Q8WWZ1 152 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 TMEM18Q96B42 140 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 STARD4Q96DR4 205 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CLUHP3Q96NS8 147 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 OR4F4Q96R69 305 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 KCNIP2Q9NS61 270 aa6.45□□□□□ -1.38
SPIDR-223ENST00000524033 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms