RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 UPF3BQ9BZI7 483 aaKnown RBP0.55□□□□□ -2.32
PCM1-217ENST00000522998 OR51I2Q9H344 312 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 MAP1LC3AQ9H492 121 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 CST9LQ9H4G1 147 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 ANGPT4Q9Y264 503 aa0.55□□□□□ -2.32
PCM1-217ENST00000522998 EML6Q6ZMW3 1958 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 TNRC6AQ8NDV7 1962 aaKnown RBP0.54□□□□□ -2.32
PCM1-217ENST00000522998 IGKV2-40A0A087WW87 121 aaPredicted RBP0.54□□□□□ -2.32
PCM1-217ENST00000522998 C1orf232A0A0U1RR37 186 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 TMEM269A0A1B0GVZ9 245 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 MEIS3P1A6NDR6 274 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 OR4C45A6NMZ5 311 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 IBA57-AS1B1ANH7 110 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 PFDN6O15212 129 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 LEPROTO15243 131 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 YEATS4O95619 227 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 IGKV2D-40P01614 121 aaPredicted RBP0.54□□□□□ -2.32
PCM1-217ENST00000522998 C1QAP02745 245 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 TYMSP04818 313 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 REG1AP05451 166 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 RPSAP08865 295 aaKnown RBP0.54□□□□□ -2.32
PCM1-217ENST00000522998 COX5BP10606 129 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 DEFA4P12838 97 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 G6PCP35575 357 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 BATFQ16520 125 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 C9orf64Q5T6V5 341 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 HDHD2Q9H0R4 259 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 CXorf21Q9HAI6 301 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 NAT8Q9UHE5 227 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 C15orf41Q9Y2V0 281 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 LHFPL6Q9Y693 200 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 PXMP4Q9Y6I8 212 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 ZNF469Q96JG9 3925 aaPredicted RBP0.54□□□□□ -2.32
PCM1-217ENST00000522998 STRCQ7RTU9 1775 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 FLT4P35916 1363 aa0.54□□□□□ -2.32
PCM1-217ENST00000522998 FBN2P35556 2912 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 IGKV3-7A0A075B6H7 116 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 A0A0A6YYH2 397 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TRBV10-2A0A0K0K1G8 114 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 A6NJ64 397 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TRAPPC2LH3BP13 241 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 CXCR6O00574 342 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 CRPP02741 224 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 KRT7P08729 469 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 FGF6P10767 208 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 MSNP26038 577 aaKnown RBP0.53□□□□□ -2.32
PCM1-217ENST00000522998 RPL12P30050 165 aaKnown RBP0.53□□□□□ -2.32
PCM1-217ENST00000522998 CASQ1P31415 396 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 MAP3K7CLP57077 242 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ELOBQ15370 118 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 FAM27BQ5VT28 67 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 LRRN1Q6UXK5 716 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 FAM151BQ6UXP7 276 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 HIST2H3AQ71DI3 136 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 COMMD7Q86VX2 200 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 DHFR2Q86XF0 187 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 Q8N2B8 174 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TMEM86AQ8N2M4 240 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TBC1D19Q8N5T2 526 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 OR1M1Q8NGA1 313 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 PIGXQ8TBF5 258 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ACOT12Q8WYK0 555 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ROPN1LQ96C74 230 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ADAT1Q9BUB4 502 aaKnown RBP0.53□□□□□ -2.32
PCM1-217ENST00000522998 OR8D2Q9GZM6 311 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 FKBP14Q9NWM8 211 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TIMM22Q9Y584 194 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ANAPC1Q9H1A4 1944 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 TONSLQ96HA7 1378 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 PIK3R4Q99570 1358 aa0.53□□□□□ -2.32
PCM1-217ENST00000522998 ORC5O43913 435 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 PPBPP02775 128 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 SRP19P09132 144 aaKnown RBP0.52□□□□□ -2.33
PCM1-217ENST00000522998 TRGC1P0CF51 173 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 IL9P15248 144 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 MYL12AP19105 171 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 CCR7P32248 378 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 CSN1S1P47710 185 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 REG1BP48304 166 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 RAB13P51153 203 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 FXYD2P54710 66 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 OR4D2P58180 307 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 CAV1Q03135 178 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 EMX1Q04741 257 aaPredicted RBP0.52□□□□□ -2.33
PCM1-217ENST00000522998 FABP9Q0Z7S8 132 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 CLVS2Q5SYC1 327 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 C1orf195Q5TG92 126 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 FAM173BQ6P4H8 233 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 SLC51BQ86UW2 128 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 RPS19BP1Q86WX3 136 aaKnown RBP0.52□□□□□ -2.33
PCM1-217ENST00000522998 DEFB125Q8N687 156 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 GPR32P1Q8NGA4 272 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 OR8B3Q8NGG8 313 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 ANKRD7Q92527 254 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 C3orf18Q9UK00 162 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 NOTCH1P46531 2555 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 DCCP43146 1447 aa0.52□□□□□ -2.33
PCM1-217ENST00000522998 C21orf140B9A014 251 aa0.51□□□□□ -2.33
PCM1-217ENST00000522998 H0Y980 276 aa0.51□□□□□ -2.33
PCM1-217ENST00000522998 I3L521 148 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms