RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 ZNF554Q86TJ5 538 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 SLC38A6Q8IZM9 456 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 OR4A5Q8NH83 315 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 CANT1Q8WVQ1 401 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 SRSF12Q8WXF0 261 aaKnown RBP4.53□□□□□ -1.68
VPS13B-211ENST00000522802 DNAJC9Q8WXX5 260 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 CHRDL1Q9BU40 450 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 CSTL1Q9H114 145 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 BANF2Q9H503 90 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 ISG20L2Q9H9L3 353 aaKnown RBP4.53□□□□□ -1.68
VPS13B-211ENST00000522802 CELA1Q9UNI1 258 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 EXOSC1Q9Y3B2 195 aaKnown RBP4.53□□□□□ -1.68
VPS13B-211ENST00000522802 AGRNO00468 2067 aa4.53□□□□□ -1.68
VPS13B-211ENST00000522802 DAPL1A0PJW8 107 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 TMEM212A6NML5 194 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 SRRM4A7MD48 611 aaKnown RBP4.52□□□□□ -1.69
VPS13B-211ENST00000522802 MPTX1A8MV57 137 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 EPM2AB3EWF7 344 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 M0R1X1 148 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 CA11O75493 328 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 APOA2P02652 100 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 SCTP09683 121 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 C8orf88P0DMB2 117 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 BDKRB2P30411 391 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 MNAT1P51948 309 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 MED21Q13503 144 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 CTF1Q16619 201 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 PRSS8Q16651 343 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 SLC25A30Q5SVS4 291 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 OR5AK2Q8NH90 309 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 ACOT12Q8WYK0 555 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 RRNAD1Q96FB5 475 aaKnown RBP4.52□□□□□ -1.69
VPS13B-211ENST00000522802 C5orf30Q96GV9 206 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 C18orf15Q96N68 181 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 ZNF184Q99676 751 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-211ENST00000522802 C1QTNF4Q9BXJ3 329 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 SELENOIQ9C0D9 397 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 C5orf66Q9H5L9 145 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 TMEM138Q9NPI0 162 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
VPS13B-211ENST00000522802 PAK1IP1Q9NWT1 392 aaPredicted RBP4.52□□□□□ -1.69
VPS13B-211ENST00000522802 DEFB131BA0A096LNP1 70 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 A0A1B0GUV1 79 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 MFSD2BA6NFX1 497 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 ZNF780AO75290 641 aaPredicted RBP4.51□□□□□ -1.69
VPS13B-211ENST00000522802 PDCD6O75340 191 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 GPX5O75715 221 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 SCGB1D1O95968 90 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 RPSAP08865 295 aaKnown RBP4.51□□□□□ -1.69
VPS13B-211ENST00000522802 MGMTP16455 207 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 FUT3P21217 361 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 POLR2IP36954 125 aaKnown RBP4.51□□□□□ -1.69
VPS13B-211ENST00000522802 PPP3R1P63098 170 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 FAM106AQ4KMX7 169 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 XAF1Q6GPH4 301 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 OR4A47Q6IF82 309 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 CEACAM19Q7Z692 300 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 SPATA12Q7Z6I5 190 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 NR2C2APQ86WQ0 139 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 UBE2DNLQ8IWF7 75 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 OR13C5Q8NGS8 318 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 ASB9Q96DX5 294 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 S100A13Q99584 98 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 NDUFAF3Q9BU61 184 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 KRTAP1-5Q9BYS1 174 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 ABRACLQ9P1F3 81 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 GMPPBQ9Y5P6 360 aa4.51□□□□□ -1.69
VPS13B-211ENST00000522802 TRAV8-7A0A075B6U6 113 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 IGHV3OR16-8A0A075B7F1 116 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 A0A1B0GW64 132 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 OR4C46A6NHA9 309 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 FKBP6O75344 327 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 CRTAPO75718 401 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 FAM107AO95990 144 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 IFNA10P01566 189 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 HOXB6P17509 224 aaKnown RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 GPR183P32249 361 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 MAP2K4P45985 399 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 GTF2A1P52655 376 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 TMEM187Q14656 261 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 IZUMO4Q1ZYL8 232 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 SPSB3Q6PJ21 355 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 GLIPR1L1Q6UWM5 242 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 LHFPL3Q86UP9 236 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 TTC9CQ8N5M4 171 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 SETD6Q8TBK2 473 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 TMEM190Q8WZ59 177 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 MARC2Q969Z3 335 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 GRAMD2BQ96HH9 432 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 CIB1Q99828 191 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 HDHD3Q9BSH5 251 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 C6orf62Q9GZU0 229 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 RIBC2Q9H4K1 309 aa4.5□□□□□ -1.69
VPS13B-211ENST00000522802 ZNF430Q9H8G1 570 aaPredicted RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 MRPL27Q9P0M9 148 aaKnown RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 RPL36Q9Y3U8 105 aaKnown RBP4.5□□□□□ -1.69
VPS13B-211ENST00000522802 IGKV1-6A0A0C4DH72 117 aa4.49□□□□□ -1.69
VPS13B-211ENST00000522802 C15orf61A6NNL5 157 aa4.49□□□□□ -1.69
VPS13B-211ENST00000522802 E7EUB6 86 aa4.49□□□□□ -1.69
VPS13B-211ENST00000522802 ITGB1BP1O14713 200 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms