RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 TGIF2LXQ8IUE1 241 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 CMTM1Q8IZ96 169 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 BEND2Q8NDZ0 799 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 LYPD6BQ8NI32 183 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 DUX5Q96PT3 197 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 NAA60Q9H7X0 242 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 PLEKHA2Q9HB19 425 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 INAFM1C9JVW0 142 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 RAMP3O60896 148 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 SRP14P37108 136 aaKnown RBP9.99□□□□□ -0.81
PABPC1-219ENST00000522387 TMEM187Q14656 261 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 FBLN7Q53RD9 439 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 UBAC2Q8NBM4 344 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 TCTEX1D2Q8WW35 142 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 HIST1H2BAQ96A08 127 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 BSCL2Q96G97 398 aaPredicted RBP9.99□□□□□ -0.81
PABPC1-219ENST00000522387 S1PR3Q99500 378 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 TOLLIPQ9H0E2 274 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 FAM212BQ9NTI7 297 aaPredicted RBP9.99□□□□□ -0.81
PABPC1-219ENST00000522387 KCNIP3Q9Y2W7 256 aa9.99□□□□□ -0.81
PABPC1-219ENST00000522387 J3QLI3 93 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 NXPH3O95157 252 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 IGKV1-16P04430 117 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 CT45A6P0DMU7 189 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 CT45A5P0DMU8 189 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 CT45A7P0DMV0 189 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 ZNF816Q0VGE8 651 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-219ENST00000522387 MIDNQ504T8 468 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 ST6GALNAC6Q969X2 333 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 RSRP1Q9BUV0 290 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 E5RGE8 158 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 TIMM23O14925 209 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 FCGR3BO75015 233 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 MBPP02686 304 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-219ENST00000522387 SNRNP70P08621 437 aaKnown RBP9.98□□□□□ -0.81
PABPC1-219ENST00000522387 SNCAP37840 140 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 ZNF616Q08AN1 781 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 VKORC1L1Q8N0U8 176 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 AJUBAQ96IF1 538 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 ARV1Q9H2C2 271 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 NSG2Q9Y328 171 aa9.98□□□□□ -0.81
PABPC1-219ENST00000522387 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 IGHV1-3A0A0C4DH29 117 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 MPPED1O15442 326 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 DUTP33316 252 aaKnown RBP9.97□□□□□ -0.81
PABPC1-219ENST00000522387 GUK1Q16774 197 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 TMEM30BQ3MIR4 351 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 AWAT1Q58HT5 328 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 TPTE2P1Q5T6R2 138 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 SLC35G3Q8N808 338 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 ZNF383Q8NA42 475 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 RITA1Q96K30 269 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 WFDC1Q9HC57 220 aa9.97□□□□□ -0.81
PABPC1-219ENST00000522387 BORCS7-ASMTA0A0B4J1R7 106 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 C7orf77A4D0Y5 90 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 LY6LH3BQJ8 138 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 M0R036 132 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 SEC11BP0C7V7 166 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 CAMLGP49069 296 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 HES1Q14469 280 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 DEFB112Q30KQ8 113 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 RNF212Q495C1 297 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 ZNF833PQ6ZTB9 187 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 LINC00311Q8N616 119 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 COMMD1Q8N668 190 aa9.96□□□□□ -0.81
PABPC1-219ENST00000522387 AMMECR1Q9Y4X0 333 aaPredicted RBP9.96□□□□□ -0.81
PABPC1-219ENST00000522387 C5orf52A6NGY3 159 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 GPR137BO60478 399 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 MT-ND4LP03901 98 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 S100A6P06703 90 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 IL3RAP26951 378 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 CEACAM3P40198 252 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 UCP3P55916 312 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 BRWD1-AS2P59051 145 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 LIAT1Q6ZQX7 453 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 SSX9Q7RTT3 188 aa9.96□□□□□ -0.82
PABPC1-219ENST00000522387 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.82
PABPC1-219ENST00000522387 LY6EQ16553 131 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 RBMS3Q6XE24 437 aaKnown RBP9.95□□□□□ -0.82
PABPC1-219ENST00000522387 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 TMEM219Q86XT9 240 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 ISOC2Q96AB3 205 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 GALNT14Q96FL9 552 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 GINS3Q9BRX5 216 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 C20orf24Q9BUV8 137 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 SCRT1Q9BWW7 348 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 A0A1W2PPI3 338 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 UBE2CO00762 179 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 ITGB1BP1O14713 200 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 IGKV1D-33P01593 117 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 IGKV1-33P01594 117 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 F2RP25116 425 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 P2RY1P47900 373 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 FHITP49789 147 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 IZUMO4Q1ZYL8 232 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 C8orf31Q8N9H6 132 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 MALSU1Q96EH3 234 aa9.95□□□□□ -0.82
PABPC1-219ENST00000522387 NABP2Q9BQ15 211 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms