RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 NTN3O00634 580 aaPredicted RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 DLEU1O43261 78 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 LINC00614P0C842 121 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 CRYBB3P26998 211 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 HGFACQ04756 655 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 LHFPL1Q86WI0 220 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 PRSS3P2Q8NHM4 247 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 WDYHV1Q96HA8 205 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 WASHC3Q9Y3C0 194 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 GRIFINA4D1Z8 144 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 GATA2P23769 480 aaPredicted RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 RND2P52198 227 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 TCTAP57738 103 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 HSPE1P61604 102 aaKnown RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 JOSD1Q15040 202 aaPredicted RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 PEAR1Q5VY43 1037 aaPredicted RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 FA2HQ7L5A8 372 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 C1QL4Q86Z23 238 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 WDFY1Q8IWB7 410 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 ACP7Q6ZNF0 438 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 PQLC2Q6ZP29 291 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 LSM10Q969L4 123 aaKnown RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 LOXL4Q96JB6 756 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 FAM117AQ9C073 453 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 RAB1BQ9H0U4 201 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 UQCR10Q9UDW1 63 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 S100A4P26447 101 aaKnown RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 RPL8P62917 257 aaKnown RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 ACSF3Q4G176 576 aaPredicted RBP9.87□□□□□ -0.83
SYNPO-204ENST00000519664 RASL11BQ9BPW5 248 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 IL19Q9UHD0 177 aa9.87□□□□□ -0.83
SYNPO-204ENST00000519664 KRTCAP3Q53RY4 240 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 HS3ST6Q96QI5 342 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 PLSCR2Q9NRY7 297 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 CISD1Q9NZ45 108 aaKnown RBP9.86□□□□□ -0.83
SYNPO-204ENST00000519664 A0A087WWC5 75 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 DIRC3C9JPN6 131 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 SRP19P09132 144 aaKnown RBP9.86□□□□□ -0.83
SYNPO-204ENST00000519664 LINC00205P59089 165 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 DNLZQ5SXM8 178 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 OR51G1Q8NGK1 321 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 PAXXQ9BUH6 204 aa9.86□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BKO60814 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BJP06899 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BOP23527 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BBP33778 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BDP58876 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 ARF6P62330 175 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BCP62807 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 QRFPP83859 136 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 FOXF2Q12947 444 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SRSF6Q13247 344 aaKnown RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST2H2BEQ16778 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BHQ93079 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SMIM12Q96EX1 92 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BNQ99877 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HIST1H2BMQ99879 126 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 RALYQ9UKM9 306 aaKnown RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SONP18583 2426 aaKnown RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 ANKHD1Q8IWZ3 2542 aaKnown RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 P01737 135 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SELLP14151 372 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HEPN1Q6WQI6 88 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 NPIPB3Q92617 1050 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SSBP3Q9BWW4 388 aaPredicted RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 CYTL1Q9NRR1 136 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 TRBV6-7A0A0A0MS04 114 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 M0R2Z0 102 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 RPL27AP46776 148 aaKnown RBP9.85□□□□□ -0.83
SYNPO-204ENST00000519664 FAM90A26D6RGX4 464 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 CEACAM3P40198 252 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SLC35E4Q6ICL7 350 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 OR4A47Q6IF82 309 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 OR8B3Q8NGG8 313 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 OR8B2Q96RD0 313 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 HSPB9Q9BQS6 159 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 SPRR3Q9UBC9 169 aa9.85□□□□□ -0.83
SYNPO-204ENST00000519664 IGHV2OR16-5A0A0B4J2B6 119 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 C18orf12Q96KH6 178 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 PLXNA4Q9HCM2 1894 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 PGPA6NDG6 321 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 CDX4O14627 284 aaPredicted RBP9.84□□□□□ -0.83
SYNPO-204ENST00000519664 DOLPP1Q86YN1 238 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 Q8WTZ3 238 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 VSIRQ9H7M9 311 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 UBTD1Q9HAC8 227 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 S4R3C0 116 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 TICRRQ7Z2Z1 1910 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 KBTBD11O94819 623 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 CA2P00918 260 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 CD5P06127 495 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 PRB4P10163 310 aaPredicted RBP9.84□□□□□ -0.83
SYNPO-204ENST00000519664 HINT1P49773 126 aaPredicted RBP9.84□□□□□ -0.83
SYNPO-204ENST00000519664 ECSCRQ19T08 205 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 LINC01560Q8TB33 94 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 NPCDR1Q9BY65 106 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 TMEM56-RWDD3S4R434 201 aa9.84□□□□□ -0.83
SYNPO-204ENST00000519664 A0A1B0GWJ7 208 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms