RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 Q6ZS49 121 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM216AQ8WUB2 273 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 TMEM171Q8WVE6 324 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 DIRC2Q96SL1 478 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 NPCDR1Q9BY65 106 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 PARLQ9H300 379 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 BARX1Q9HBU1 254 aaPredicted RBP9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 IGHV1-18A0A0C4DH31 117 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 PCSK4Q6UW60 755 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 IGKV1-6A0A0C4DH72 117 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 COL5A1-AS1Q5SY13 56 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM216BQ8N7L0 139 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 OR1L4Q8NGR5 311 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 SGMS2Q8NHU3 365 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 INSIG2Q9Y5U4 225 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 CACNA1BQ00975 2339 aa9.44□□□□□ -0.9
PCDHGB4-201ENST00000519479 C10orf142B7Z368 130 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 SLC25A5P05141 298 aaKnown RBP9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 ICAM4Q14773 271 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 TBR1Q16650 682 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 MST1LQ2TV78 715 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 Q6P435 159 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 TBX15Q96SF7 602 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 TIMM9Q9Y5J7 89 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 IGHV3-72A0A0B4J1Y9 119 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 A0A1W2PRD5 423 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 A0A1W2PRF3 423 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 A0A1W2PRM7 423 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 HELTA6NFD8 242 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 KIAA1324LA8MWY0 1029 aaPredicted RBP9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 EGR1P18146 543 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 CD40P25942 277 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 TCL1AP56279 114 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 C11orf42Q8N5U0 333 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM57AQ8TBR7 257 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 PCGF1Q9BSM1 259 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 CRIM1Q9NZV1 1036 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 IGKV1-5P01602 117 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 ARL14EPLP0DKL9 152 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 AMTP48728 403 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 OR1B1Q8NGR6 318 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 OR4X1Q8NH49 305 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 SSC4DQ8WTU2 575 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 SEBOXQ9HB31 216 aaPredicted RBP9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 FREM1Q5H8C1 2179 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 TRBV6-6A0A0A6YYG2 114 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 NCBP2LA6PVI3 153 aaKnown RBP9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 KBTBD11O94819 623 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM3BP58499 235 aaPredicted RBP9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 RPEL1Q2QD12 228 aa9.43□□□□□ -0.9
PCDHGB4-201ENST00000519479 A0A0G2JRQ6 117 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 FOXI3A8MTJ6 420 aaPredicted RBP9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 RPL8P62917 257 aaKnown RBP9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 TMEM250H0YL14 139 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 SNRPCP09234 159 aaKnown RBP9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 USF1P22415 310 aaPredicted RBP9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 SRP14P37108 136 aaKnown RBP9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 CT45A10P0DMU9 189 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 RAB1CQ92928 201 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 RNF2Q99496 336 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 CHRDL1Q9BU40 450 aa9.42□□□□□ -0.9
PCDHGB4-201ENST00000519479 CRISP2P16562 243 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 RAB1BQ9H0U4 201 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 VSIRQ9H7M9 311 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 TUBA4BQ9H853 241 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 PLSCR4Q9NRQ2 329 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 CBLN4Q9NTU7 201 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 K7ENP7 123 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 RPL30P62888 115 aaKnown RBP9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 RPL11P62913 178 aaKnown RBP9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 Q6ZRM9 215 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 LURAP1LQ8IV03 231 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 STARD4Q96DR4 205 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 RBM14Q96PK6 669 aaKnown RBP9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 ELOVL5Q9NYP7 299 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 IGHV3-21A0A0B4J1V1 117 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 CSN1S1P47710 185 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 MORN2Q502X0 79 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 C10orf113Q5VZT2 155 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 HIF1ANQ9NWT6 349 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 DCAF16Q9NXF7 216 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 METRNQ9UJH8 293 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 AMMECR1Q9Y4X0 333 aaPredicted RBP9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 C9JQL5 133 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 CHEK1O14757 476 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 GCGP01275 180 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 LYZP61626 148 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM90A1Q86YD7 464 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 PDPNQ86YL7 162 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 SPOCK3Q9BQ16 436 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 TXNDC17Q9BRA2 123 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 GNB4Q9HAV0 340 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 RNF24Q9Y225 148 aa9.41□□□□□ -0.9
PCDHGB4-201ENST00000519479 COL6A6A6NMZ7 2263 aa9.4□□□□□ -0.9
PCDHGB4-201ENST00000519479 COLCA2A8K830 154 aa9.4□□□□□ -0.9
PCDHGB4-201ENST00000519479 FAM157AC9JC47 383 aa9.4□□□□□ -0.9
PCDHGB4-201ENST00000519479 MLNRO43193 412 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms