RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 TRIM16LQ309B1 348 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 H2BFWTQ7Z2G1 175 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 SEC22AQ96IW7 307 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 FKBP11Q9NYL4 201 aa17.65■□□□□ 0.42
SKP1-206ENST00000519321 NUDT19A8MXV4 375 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 SOX15O60248 233 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 BRI3O95415 125 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 TSPAN15O95858 294 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 ZNF846Q147U1 533 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 C10orf55Q5SWW7 151 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 THOC7Q6I9Y2 204 aaKnown RBP17.64■□□□□ 0.41
SKP1-206ENST00000519321 TREML4Q6UXN2 200 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 SLC25A42Q86VD7 318 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 ZNF695Q8IW36 515 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 FAM110DQ8TAY7 271 aaPredicted RBP17.64■□□□□ 0.41
SKP1-206ENST00000519321 MYOZ3Q8TDC0 251 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 UBE2E2Q96LR5 201 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 TMEM222Q9H0R3 208 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 PRNDQ9UKY0 176 aa17.64■□□□□ 0.41
SKP1-206ENST00000519321 TNCP24821 2201 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 TRAV3A0A0B4J244 114 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 IGKV1-39P01597 117 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 IGKV1D-39P04432 117 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 OR5AC1P0C628 307 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 OR9G9P0C7N8 305 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 SP6Q3SY56 376 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 ASPHD1Q5U4P2 390 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 LCNL1Q6ZST4 164 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 KLHL30-AS1Q8NEE0 82 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 OR5T1Q8NG75 326 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 GALNT14Q96FL9 552 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 FYTTD1Q96QD9 318 aaKnown RBP17.63■□□□□ 0.41
SKP1-206ENST00000519321 SRSF8Q9BRL6 282 aaKnown RBP17.63■□□□□ 0.41
SKP1-206ENST00000519321 KLK15Q9H2R5 256 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 ZNF355PQ9NSJ1 428 aa17.63■□□□□ 0.41
SKP1-206ENST00000519321 PIGBOS1A0A0B4J2F0 54 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 LINC00854A0A1B0GVQ3 168 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 CDS2O95674 445 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 ANXA3P12429 323 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 AKR1C4P17516 323 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 AKR1C2P52895 323 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 TTC9CQ8N5M4 171 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 ZNF491Q8N8L2 437 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 ADAD2Q8NCV1 583 aaKnown RBP17.62■□□□□ 0.41
SKP1-206ENST00000519321 GLYATL2Q8WU03 294 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 TMEM230Q96A57 120 aa17.62■□□□□ 0.41
SKP1-206ENST00000519321 TEX22C9J3V5 150 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 OR2B8PP59922 312 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 TMEM128Q5BJH2 165 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 HSD17B13Q7Z5P4 300 aaPredicted RBP17.61■□□□□ 0.41
SKP1-206ENST00000519321 OR1L8Q8NGR8 309 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 OR4A16Q8NH70 328 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 C4orf3Q8WVX3 66 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 RRNAD1Q96FB5 475 aaKnown RBP17.61■□□□□ 0.41
SKP1-206ENST00000519321 COA4Q9NYJ1 87 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 ZNF257Q9Y2Q1 563 aa17.61■□□□□ 0.41
SKP1-206ENST00000519321 PF4P02776 101 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 TRGV3P03979 118 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 APELAP0DMC3 54 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 CCR6P51684 374 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 TPPP2P59282 170 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 TMED4Q7Z7H5 227 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 FAM219AQ8IW50 185 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 OR5B3Q8NH48 314 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 RNASE11Q8TAA1 199 aaKnown RBP17.6■□□□□ 0.41
SKP1-206ENST00000519321 RBPMSQ93062 196 aaKnown RBP17.6■□□□□ 0.41
SKP1-206ENST00000519321 MS4A10Q96PG2 267 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 QTRT1Q9BXR0 403 aaKnown RBP17.6■□□□□ 0.41
SKP1-206ENST00000519321 OR51B2Q9Y5P1 312 aa17.6■□□□□ 0.41
SKP1-206ENST00000519321 A0A0G2JLM5 398 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 C15orf61A6NNL5 157 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 NPIPB5A8MRT5 1133 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 LYRM1O43325 122 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 NDUFB6O95139 128 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 DHFRP00374 187 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TRAPPC2P0DI81 140 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TRAPPC2BP0DI82 140 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 SRPXP78539 464 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 KIAA0141Q14154 515 aaPredicted RBP17.59■□□□□ 0.41
SKP1-206ENST00000519321 C8orf86Q6ZUL3 223 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 CENPSQ8N2Z9 138 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 IL22RA2Q969J5 263 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TMEM56Q96MV1 263 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TMEM14BQ9NUH8 114 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TMEM56-RWDD3S4R434 201 aa17.59■□□□□ 0.41
SKP1-206ENST00000519321 TEX50A0A1B0GTY4 177 aa17.58■□□□□ 0.4
SKP1-206ENST00000519321 HMX3A6NHT5 357 aa17.58■□□□□ 0.4
SKP1-206ENST00000519321 E7EUB6 86 aa17.58■□□□□ 0.4
SKP1-206ENST00000519321 RBMXL2O75526 392 aaKnown RBP17.58■□□□□ 0.4
SKP1-206ENST00000519321 UBE2MP61081 183 aaKnown RBP17.58■□□□□ 0.4
SKP1-206ENST00000519321 CASTOR1Q8WTX7 329 aa17.58■□□□□ 0.4
SKP1-206ENST00000519321 NSG2Q9Y328 171 aa17.58■□□□□ 0.4
SKP1-206ENST00000519321 PLA2G10O15496 165 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 IGKV1-5P01602 117 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 MYOD1P15172 320 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 MYCNOSP40205 109 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 SUPT4H1P63272 117 aaKnown RBP17.57■□□□□ 0.4
SKP1-206ENST00000519321 RUNX1Q01196 453 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 TMEM187Q14656 261 aa17.57■□□□□ 0.4
SKP1-206ENST00000519321 TMEM268Q5VZI3 342 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms