RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 KRASP01116 189 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 IGHV3-23P01764 117 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 CD74P04233 296 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 ECI1P42126 302 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 PPP5CP53041 499 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 UCP3P55916 312 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 RNASE10Q5GAN6 216 aaKnown RBP10.2□□□□□ -0.78
VEGFA-219ENST00000518824 TMEM229BQ8NBD8 167 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 DMBX1Q8NFW5 382 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 OR10W1Q8NGF6 305 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 GPR61Q9BZJ8 451 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 NXF2Q9GZY0 626 aaKnown RBP10.2□□□□□ -0.78
VEGFA-219ENST00000518824 SLC2A9Q9NRM0 540 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 DMRT1Q9Y5R6 373 aa10.2□□□□□ -0.78
VEGFA-219ENST00000518824 A0A0G2JLM5 398 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 IGLC7A0M8Q6 106 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 CTRB1P17538 263 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 PSMB6P28072 239 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 TNFSF8P32971 234 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 MAS1LP35410 378 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 EXOSC2Q13868 293 aaKnown RBP10.19□□□□□ -0.78
VEGFA-219ENST00000518824 IL18Q14116 193 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 IZUMO4Q1ZYL8 232 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 DEFB121Q5J5C9 76 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 CTRB2Q6GPI1 263 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 ACSM6Q6P461 480 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 CMTM1Q8IZ96 169 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 OR4A5Q8NH83 315 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 CD300LFQ8TDQ1 290 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 SMIM4Q8WVI0 70 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 SOSTQ9BQB4 213 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 RANGRFQ9HD47 186 aaPredicted RBP10.19□□□□□ -0.78
VEGFA-219ENST00000518824 COMMD9Q9P000 198 aa10.19□□□□□ -0.78
VEGFA-219ENST00000518824 PEF1Q9UBV8 284 aaKnown RBP10.19□□□□□ -0.78
VEGFA-219ENST00000518824 TEX50A0A1B0GTY4 177 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 NPIPB5A8MRT5 1133 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 BMPR1BO00238 502 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 SAP30O75446 220 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 TPPPO94811 219 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 RAB3DO95716 219 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 CRYGCP07315 174 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 PGAM2P15259 253 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 KLF5Q13887 457 aaPredicted RBP10.18□□□□□ -0.78
VEGFA-219ENST00000518824 STEAP1BQ6NZ63 245 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 IL34Q6ZMJ4 242 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 SLC38A6Q8IZM9 456 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 MCFD2Q8NI22 146 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 BORCS5Q969J3 196 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 USMG5Q96IX5 58 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 FBXL7Q9UJT9 491 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 ZNF257Q9Y2Q1 563 aa10.18□□□□□ -0.78
VEGFA-219ENST00000518824 CCDC160A6NGH7 325 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 PPP5D1E7EU14 171 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 NOL3O60936 208 aaKnown RBP10.17□□□□□ -0.78
VEGFA-219ENST00000518824 HLA-AP01891 365 aaKnown RBP10.17□□□□□ -0.78
VEGFA-219ENST00000518824 IFNA6P05013 189 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 EDN2P20800 178 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 SYNJ2BPP57105 145 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 TAS2R19P59542 299 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 ATP5G2Q06055 141 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 WT1-ASQ06250 92 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 C15orf32Q32M92 178 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 SCGB2B2Q4G0G5 96 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 LPCAT3Q6P1A2 487 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 ARRDC1Q8N5I2 433 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 OR4C16Q8NGL9 310 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 OR13C8Q8NGS7 320 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 MARCH1Q8TCQ1 289 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 SEC22AQ96IW7 307 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 CCDC140Q96MF4 163 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 TP53RKQ96S44 253 aa10.17□□□□□ -0.78
VEGFA-219ENST00000518824 IGLV11-55A0A075B6I3 123 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 DPPA5A6NC42 116 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 MFSD2BA6NFX1 497 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 FAM223BA6NKX1 122 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 CTDSPLO15194 276 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 SPNP16150 400 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 MFAP2P55001 183 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 PIGPP57054 158 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 ERVK-16P61578 105 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 RND3P61587 244 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 SP6Q3SY56 376 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 FAM223AQ8IWN6 122 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 NECAP1Q8NC96 275 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 AIFM2Q9BRQ8 373 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 COMMD5Q9GZQ3 224 aa10.16□□□□□ -0.78
VEGFA-219ENST00000518824 LSM4Q9Y4Z0 139 aaKnown RBP10.16□□□□□ -0.78
VEGFA-219ENST00000518824 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.15□□□□□ -0.78
VEGFA-219ENST00000518824 IGKV1-5P01602 117 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 TBPP20226 339 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 ZP3P21754 424 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 PTBP1P26599 531 aaKnown RBP eCLIP10.15□□□□□ -0.78
VEGFA-219ENST00000518824 MRPS10P82664 201 aaKnown RBP10.15□□□□□ -0.78
VEGFA-219ENST00000518824 KLK9Q2XQG4 91 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 ADAMTSL5Q6ZMM2 481 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 ZNF429Q86V71 674 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 SLC25A42Q86VD7 318 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 TERB2Q8NHR7 220 aa10.15□□□□□ -0.78
VEGFA-219ENST00000518824 C15orf40Q8WUR7 153 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms