RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 C9orf172C9J069 976 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 TNFSF10P50591 281 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 ID3Q02535 119 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 VAMP3Q15836 100 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 C5orf24Q7Z6I8 188 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR2D3Q8NGH3 330 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 EAF1Q96JC9 268 aaPredicted RBP9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 KLF7O75840 302 aaPredicted RBP9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 KBTBD11O94819 623 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 ORM1P02763 201 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 CECR9P0C854 216 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 CEACAM1P13688 526 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 SRP14P37108 136 aaKnown RBP9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 SPSB3Q6PJ21 355 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 C5orf17Q8NAS9 161 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 HIST1H2BLQ99880 126 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 PSMG3Q9BT73 122 aaPredicted RBP9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 DEPPQ9NTK1 212 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 P01737 135 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 PTGDSP41222 190 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 PTTG1IPP53801 180 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 RNF2Q99496 336 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM208Q9BTX3 173 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 TMEM140Q9NV12 185 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 GOLT1BQ9Y3E0 138 aa9.16□□□□□ -0.94
PCDHGA1-202ENST00000517417 OR5AL1P0C617 328 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 RPL8P62917 257 aaKnown RBP9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 LBHQ53QV2 105 aaPredicted RBP9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 LYPD6BQ8NI32 183 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 ZNF596Q8TC21 504 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 UFC1Q9Y3C8 167 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 LAMA1P25391 3075 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 PDE6DO43924 150 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 CELA3BP08861 270 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 LINC00869P0C866 280 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 USF1P22415 310 aaPredicted RBP9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 NHLH1Q02575 133 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 TNFRSF9Q07011 255 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 DOLPP1Q86YN1 238 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 LINC01560Q8TB33 94 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 DPF1Q92782 380 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 GRAMD2BQ96HH9 432 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 CBLN4Q9NTU7 201 aa9.15□□□□□ -0.94
PCDHGA1-202ENST00000517417 SNURFLB1AK76 121 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 HNRNPA3P51991 378 aaKnown RBP9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 HIST3H3Q16695 136 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 SAXO1Q8IYX7 474 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 WDR31Q8NA23 367 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 RAB24Q969Q5 203 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 PERPQ96FX8 193 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 TBX15Q96SF7 602 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 VPS25Q9BRG1 176 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 LINC00470Q9BZP3 86 aa9.15□□□□□ -0.95
PCDHGA1-202ENST00000517417 FAM87AP0C7U9 286 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 CRYGSP22914 178 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZNF137PP52743 207 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 PSG7Q13046 419 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 C14orf144Q96I85 54 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 IL19Q9UHD0 177 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 ANOS1P23352 680 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 LRRC75BQ2VPJ9 315 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 CYP2G1PQ6ZSU1 146 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 ZNF525Q8N782 197 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 STARD4Q96DR4 205 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 PTPRQQ9UMZ3 2332 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 RND2P52198 227 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 MUC6Q6W4X9 2439 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 C17orf82Q86X59 251 aaPredicted RBP9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 WFDC3Q8IUB2 231 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 LSM10Q969L4 123 aaKnown RBP9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 BMPR1BO00238 502 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 HYPMO75409 117 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 REG1AP05451 166 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 ACSF3Q4G176 576 aaPredicted RBP9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 DIRC2Q96SL1 478 aa9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 REPIN1Q9BWE0 567 aaKnown RBP9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 YTHDF2Q9Y5A9 579 aaKnown RBP9.14□□□□□ -0.95
PCDHGA1-202ENST00000517417 HGFACQ04756 655 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 WDR73Q6P4I2 378 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR5R1Q8NH85 324 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 IGHV3-35A0A0C4DH35 117 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 C12orf77C9JDV5 145 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 MC5RP33032 325 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 HSPE1P61604 102 aaKnown RBP9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 RPL39P5Q59GN2 51 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 RABAC1Q9UI14 185 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 MFAP2P55001 183 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 HLA-DRB5Q30154 266 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 CCDC144NLQ6NUI1 221 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 STXBP6Q8NFX7 210 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 OR1L6Q8NGR2 347 aa9.13□□□□□ -0.95
PCDHGA1-202ENST00000517417 SGK494Q96LW2 274 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms