RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 F8W1H4 67 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 RFXANKO14593 260 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 UGT2B11O75310 529 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 STK16O75716 305 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 GIMD1P0DJR0 217 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 SULT1A3P0DMM9 295 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 SULT1A4P0DMN0 295 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 GFAPP14136 432 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 ZNF24P17028 368 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 BGNP21810 368 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 ATP5G3P48201 142 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 PSMB3P49720 205 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 EIF2B2P49770 351 aaKnown RBP-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 TBPL1P62380 186 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 CBX3Q13185 183 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 DEFB128Q7Z7B8 93 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 GAPTQ8N292 157 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 TMEM75Q8N9X5 138 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR4A4PQ8NGN8 299 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 Q8WTZ3 238 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 C11orf40Q8WZ69 217 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 ABHD14BQ96IU4 210 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 CABS1Q96KC9 395 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 ULBP3Q9BZM4 244 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 UCK2Q9BZX2 261 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 COA1Q9GZY4 146 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 SLC38A1Q9H2H9 487 aa-2.99□□□□□ -2.89
RNU6-542P-201ENST00000516405 A0A1W2PRS3 328 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 SNNO75324 88 aaPredicted RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 IL6P05231 212 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 HTR1AP08908 422 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 HIST1H1CP16403 213 aaKnown RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 SRMP19623 302 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 CD9P21926 228 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 TNNT2P45379 298 aaPredicted RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 SCGB2A2Q13296 93 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 PPP1R1AQ13522 171 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 FOXI2Q6ZQN5 318 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 PPTC7Q8NI37 304 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 ITFG1Q8TB96 612 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 SLC38A4Q969I6 547 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 CCDC43Q96MW1 224 aaKnown RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 ZMAT2Q96NC0 199 aaKnown RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 C2orf40Q9H1Z8 148 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 MED28Q9H204 178 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 FBXL15Q9H469 300 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 MCUBQ9NWR8 336 aa-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 PSMC3IPQ9P2W1 217 aaPredicted RBP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP-3□□□□□ -2.89
RNU6-542P-201ENST00000516405 TNS3Q68CZ2 1445 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 HACD1B0YJ81 288 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 K7ERQ8 282 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 DFFAO00273 331 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 LEPROTO15243 131 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 GSTZ1O43708 216 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 NSA2O95478 260 aaKnown RBP-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 AK1P00568 194 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 IGLV1-51P01701 117 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 FAM228BP0C875 321 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 F8A1P23610 371 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 HLA-DMBP28068 263 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 STX3Q13277 289 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 TPD52L1Q16890 204 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 SLC8B1Q6J4K2 584 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 TTC29Q8NA56 475 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR52R1Q8NGF1 315 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR52K2Q8NGK3 314 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR13C2Q8NGS9 318 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR13C9Q8NGT0 318 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR11L1Q8NGX0 322 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 EPDR1Q9UM22 224 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 U3KQV3 271 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 V9GYY5 206 aaPredicted RBP-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 SSC5DA1L4H1 1573 aa-3.01□□□□□ -2.89
RNU6-542P-201ENST00000516405 VIRMAQ69YN4 1812 aaKnown RBP-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 TRAV3A0A0B4J244 114 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 C9JCJ5 164 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 CDK14O94921 469 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 GCGP01275 180 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 AKR1C4P17516 323 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 OR10J1P30954 320 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 TNNT3P45378 269 aaPredicted RBP-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 RAB10P61026 200 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 NUCB1Q02818 461 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 EDDM3AQ14507 147 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 C5orf64Q2M2E5 130 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 DEFB135Q30KP9 77 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 C2orf76Q3KRA6 126 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 XAF1Q6GPH4 301 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 SPATA24Q86W54 205 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 OFCC1Q8IZS5 231 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 C10orf111Q8N326 155 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 OPTCQ9UBM4 332 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 BOKQ9UMX3 212 aaPredicted RBP-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 CASZ1Q86V15 1759 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 C10orf71Q711Q0 1435 aa-3.02□□□□□ -2.89
RNU6-542P-201ENST00000516405 FAM186AA6NE01 2351 aa-3.03□□□□□ -2.89
RNU6-542P-201ENST00000516405 NCF1CA8MVU1 366 aaPredicted RBP-3.03□□□□□ -2.89
RNU6-542P-201ENST00000516405 K7EQM0 130 aa-3.03□□□□□ -2.89
RNU6-542P-201ENST00000516405 M0R1B8 84 aa-3.03□□□□□ -2.89
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms