RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TMEM170BQ5T4T1 132 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 ASPHD2Q6ICH7 369 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 DNASE2BQ8WZ79 361 aa11.33□□□□□ -0.6
TCOF1-214ENST00000515035 ZNF501Q96CX3 271 aaPredicted RBP11.33□□□□□ -0.6
TCOF1-214ENST00000515035 SCO2A0A1W2PP80 73 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 CGAP01215 116 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 ATP5G3P48201 142 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 P2RY6Q15077 328 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 GREM1O60565 184 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 MFAP4P55083 255 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 RPL23P62829 140 aaKnown RBP11.32□□□□□ -0.6
TCOF1-214ENST00000515035 GEMIN7Q9H840 131 aaKnown RBP11.32□□□□□ -0.6
TCOF1-214ENST00000515035 TRAV9-1A0A075B6T8 112 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 GPR183P32249 361 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 PAPPA-AS1Q5QFB9 102 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 ITLN1Q8WWA0 313 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 JPT1Q9UK76 154 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 MRPS16Q9Y3D3 137 aaKnown RBP11.32□□□□□ -0.6
TCOF1-214ENST00000515035 MIA3Q5JRA6 1907 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 CDX4O14627 284 aaPredicted RBP11.32□□□□□ -0.6
TCOF1-214ENST00000515035 APOMO95445 188 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 SLC22A18ASQ8N1D0 253 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 PRR7Q8TB68 274 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 TTTY12Q9BZ98 90 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 DOCK5Q9H7D0 1870 aa11.32□□□□□ -0.6
TCOF1-214ENST00000515035 A0A1W2PS18 150 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 UBE2L6O14933 153 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 REG1AP05451 166 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 BTCP35070 178 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 C16orf97H3BN30 126 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 PPP1R17O96001 155 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 ZNF146Q15072 292 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 MOB4Q9Y3A3 225 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 SBF2Q86WG5 1849 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 MDC1Q14676 2089 aaKnown RBP11.31□□□□□ -0.6
TCOF1-214ENST00000515035 SAP25Q8TEE9 199 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 LEAP2Q969E1 77 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 RTBDNQ9BSG5 229 aaPredicted RBP11.31□□□□□ -0.6
TCOF1-214ENST00000515035 PRDM6Q9NQX0 595 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 IDI2-AS1Q9NZ38 188 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 UCP1P25874 307 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 TCF23Q7RTU1 214 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 LINC00305Q7Z4B0 112 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 LRTM2Q8N967 370 aa11.31□□□□□ -0.6
TCOF1-214ENST00000515035 DOPEY2Q9Y3R5 2298 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 ATP5LO75964 103 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 GPR6P46095 362 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-214ENST00000515035 TFF3Q07654 80 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 PSMG4Q5JS54 123 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 NUP37Q8NFH4 326 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 FOXC2Q99958 501 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 PTPRFP10586 1907 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 IGKV3D-11A0A0A0MRZ8 115 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 C4orf51C9J302 202 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 MOSP00540 346 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 IGKV3-11P04433 115 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 VCX2Q9H322 139 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-214ENST00000515035 TGFAP01135 160 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 IFI6P09912 130 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 CRYBA2P53672 197 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 ATP5IP56385 69 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-214ENST00000515035 TMPRSS3P57727 454 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 ACSF3Q4G176 576 aaPredicted RBP11.3□□□□□ -0.6
TCOF1-214ENST00000515035 HIST1H2BLQ99880 126 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 PTGDSP41222 190 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 RIPPLY3P57055 190 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 C1QL2Q7Z5L3 287 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 MRAP2Q96G30 205 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 AICDAQ9GZX7 198 aa11.3□□□□□ -0.6
TCOF1-214ENST00000515035 A0A1B0GTI1 187 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 A0A1W2PQM1 296 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 NBEAP1P0C6P0 100 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 LINC00614P0C842 121 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 ICAM4Q14773 271 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 RIPPLY2Q5TAB7 128 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 PCSK4Q6UW60 755 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 GLRX5Q86SX6 157 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 SLC25A45Q8N413 288 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 PRDM14Q9GZV8 571 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 LOC101059948A0A1B0GTJ6 334 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 GPX1P07203 203 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 RNF126Q9BV68 326 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 DICER1Q9UPY3 1922 aaKnown RBP11.29□□□□□ -0.6
TCOF1-214ENST00000515035 DDB2Q92466 427 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 LPAR2Q9HBW0 351 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 ZNF257Q9Y2Q1 563 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 ZNFX1Q9P2E3 1918 aaKnown RBP11.29□□□□□ -0.6
TCOF1-214ENST00000515035 hCG_38984A0A1B0GV85 526 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 A0A1W2PRS3 328 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 PEX7O00628 323 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 ZNF56Q15929 161 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 UNQ5815/PRO19632Q6UWF5 114 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 FAM214BQ7L5A3 538 aa11.29□□□□□ -0.6
TCOF1-214ENST00000515035 SLC25A28Q96A46 364 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms