RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 IGHMP01871 453 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 VPREB1P12018 145 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 HILS1P60008 231 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 TMEM14EPQ6UXP3 125 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 TMEM64Q6YI46 380 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 PRSS45Q7RTY3 260 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 GCSAMQ8N6F7 178 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 DNAJA3Q96EY1 480 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 PRELID3AQ96N28 172 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 MRPL32Q9BYC8 188 aaKnown RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 FZR1Q9UM11 496 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 PROCRQ9UNN8 238 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 SRRM4A7MD48 611 aaKnown RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 SLC25A5P05141 298 aaKnown RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 FABP2P12104 132 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 RPL13AP40429 203 aaKnown RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 FBXW4P57775 412 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 FOXI1Q12951 378 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 HES1Q14469 280 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 TIFABQ6ZNK6 161 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 OR4K13Q8NH42 304 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 OR1L3Q8NH93 324 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 GNPNAT1Q96EK6 184 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 SH3BGRL3Q9H299 93 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 TP53TG3Q9ULZ0 132 aa5.94□□□□□ -1.46
NIPBL-208ENST00000514335 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.94□□□□□ -1.46
NIPBL-208ENST00000514335 NCOR1O75376 2440 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 COL4A3Q01955 1670 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 C5orf63A6NC05 138 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 DPRXA6NFQ7 191 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 GFRA3O60609 400 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 DANCRP0C864 163 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 FKBP2P26885 142 aaKnown RBP5.93□□□□□ -1.46
NIPBL-208ENST00000514335 CDAP32320 146 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 PRSS3P35030 304 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 PFN2P35080 140 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 KIR2DS2P43631 304 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 NCBP2-AS2Q69YL0 99 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 C9orf139Q6ZV77 190 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 SSX8Q7RTT4 187 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF550Q7Z398 422 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 STPG3Q8N7X2 389 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 CYB561D1Q8N8Q1 229 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 NEURL3Q96EH8 262 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 CCDC140Q96MF4 163 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 MCHR1Q99705 422 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 IFI27L2Q9H2X8 130 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 KCNIP2Q9NS61 270 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 GON4LQ3T8J9 2241 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 GGTLC3B5MD39 225 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 CDC42EP2O14613 210 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 DRD3P35462 400 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF93P35789 620 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-208ENST00000514335 ACVRL1P37023 503 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 SEC11AP67812 179 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF85Q03923 595 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 MSMO1Q15800 293 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 PLK5Q496M5 336 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 TECRLQ5HYJ1 363 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 NR2C2APQ86WQ0 139 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 TPRX1Q8N7U7 411 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 RNF166Q96A37 237 aaPredicted RBP5.93□□□□□ -1.46
NIPBL-208ENST00000514335 SLC25A38Q96DW6 304 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 FAM103A1Q9BTL3 118 aaKnown RBP5.93□□□□□ -1.46
NIPBL-208ENST00000514335 CXXC4Q9H2H0 198 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 SLC2A6Q9UGQ3 507 aa5.93□□□□□ -1.46
NIPBL-208ENST00000514335 MKI67P46013 3256 aaKnown RBP5.93□□□□□ -1.46
NIPBL-208ENST00000514335 PROSCO94903 275 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 LGALS2P05162 132 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 PPICP45877 212 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 HLA-DRB3P79483 266 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 FAM27D1Q5T7N8 215 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 C10orf126Q8N4M7 172 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 ZFP62Q8NB50 900 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 FAM213BQ8TBF2 198 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 C18orf15Q96N68 181 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 VGLL1Q99990 258 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 SSBP3Q9BWW4 388 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 CST11Q9H112 138 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 BCL2L10Q9HD36 194 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF257Q9Y2Q1 563 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 NSG2Q9Y328 171 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 TRAV9-2A0A087WT02 112 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 RIIAD1A6NNX1 92 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 TMEM250H0YL14 139 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 ZNF253O75346 499 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 SERF1AO75920 110 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 SMIM4Q8WVI0 70 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 ADAT3Q96EY9 351 aaPredicted RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 GPR21Q99679 349 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 SLAMF8Q9P0V8 285 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 PILRAQ9UKJ1 303 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 SF3B6Q9Y3B4 125 aaKnown RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 RPL36Q9Y3U8 105 aaKnown RBP5.92□□□□□ -1.46
NIPBL-208ENST00000514335 HES2Q9Y543 173 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 HCFC1P51610 2035 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 OR1I1O60431 355 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 NEURL1O76050 574 aa5.92□□□□□ -1.46
NIPBL-208ENST00000514335 APOMO95445 188 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms