RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 M6PRP20645 277 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 GPR6P46095 362 aaPredicted RBP12.11□□□□□ -0.47
VCAN-211ENST00000513984 EFNA4P52798 201 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 RAB11AP62491 216 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 DEFA5Q01523 94 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 PEA15Q15121 130 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 ETV3LQ6ZN32 361 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 SLC24A4Q8NFF2 622 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 VSTM2AQ8TAG5 236 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 KIAA1456Q9P272 454 aa12.11□□□□□ -0.47
VCAN-211ENST00000513984 BUB1B-PAK6H3BSN5 160 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 USF1P22415 310 aaPredicted RBP12.1□□□□□ -0.47
VCAN-211ENST00000513984 NPY1RP25929 384 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 DLX1P56177 255 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 CCL20P78556 96 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 DLK1P80370 383 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 ATRAIDQ6UW56 229 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 SVBPQ8N300 66 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 Q8N7P7 452 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 OR4P4Q8NGL7 312 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 TMEM167AQ8TBQ9 72 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 NPCDR1Q9BY65 106 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 ONECUT1Q9UBC0 465 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 WDR83OSQ9Y284 106 aa12.1□□□□□ -0.47
VCAN-211ENST00000513984 AMMECR1Q9Y4X0 333 aaPredicted RBP12.1□□□□□ -0.47
VCAN-211ENST00000513984 TEX50A0A1B0GTY4 177 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 A0A1B0GV50 99 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 M0R1W7 72 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 NDUFS7O75251 213 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 CD1BP29016 333 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 RAB2AP61019 212 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 SFT2D1Q8WV19 159 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 MBD3L1Q8WWY6 194 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 EIF5A2Q9GZV4 153 aaKnown RBP12.09□□□□□ -0.47
VCAN-211ENST00000513984 SMDT1Q9H4I9 107 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 PLEKHA3Q9HB20 300 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 LOC105371242A0A075B767 164 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 OVOL3O00110 214 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 RPL8P62917 257 aaKnown RBP12.09□□□□□ -0.47
VCAN-211ENST00000513984 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 GUCA2BQ16661 112 aa12.09□□□□□ -0.47
VCAN-211ENST00000513984 RCC1LQ96I51 464 aaKnown RBP12.09□□□□□ -0.47
VCAN-211ENST00000513984 C17orf112F2Z3M2 114 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 MPDU1O75352 247 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 CA2P00918 260 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 COX7A1P24310 79 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 LGALS7P47929 136 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 ELLP55199 621 aaPredicted RBP12.08□□□□□ -0.48
VCAN-211ENST00000513984 ATP5IP56385 69 aaPredicted RBP12.08□□□□□ -0.48
VCAN-211ENST00000513984 ACSM6Q6P461 480 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 HINT2Q9BX68 163 aa12.08□□□□□ -0.48
VCAN-211ENST00000513984 NKX6-2Q9C056 277 aaPredicted RBP12.08□□□□□ -0.48
VCAN-211ENST00000513984 IGHV1-3A0A0C4DH29 117 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 RBFOX3A6NFN3 312 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 INS-IGF2F8WCM5 200 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 LY6LH3BQJ8 138 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 MBP02144 154 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 IFNA4P05014 189 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 PRB3Q04118 309 aaPredicted RBP12.07□□□□□ -0.48
VCAN-211ENST00000513984 BSXQ3C1V8 233 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 VMA21Q3ZAQ7 101 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 TREML4Q6UXN2 200 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 PNKDQ8N490 385 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 ZNF709Q8N972 641 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 OR1L8Q8NGR8 309 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 COMMD5Q9GZQ3 224 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 NDUFA4L2Q9NRX3 87 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 KPTNQ9Y664 436 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 DOPEY1Q5JWR5 2465 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 SOX15O60248 233 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 IGKV1D-33P01593 117 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 IGKV1-33P01594 117 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 PPT1P50897 306 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 ARF6P62330 175 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 BTN1A1Q13410 526 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 SSX7Q7RTT5 188 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 INSIG2Q9Y5U4 225 aa12.07□□□□□ -0.48
VCAN-211ENST00000513984 PLXNB1O43157 2135 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 FNDC10F2Z333 226 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 SNAPINO95295 136 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 IGHV2-5P01817 119 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 OPN1MWP04001 364 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 OPN1MW2P0DN77 364 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 OPN1MW3P0DN78 364 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 PRTN3P24158 256 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 HNF4GQ14541 408 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 C2orf83Q53S99 150 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 ZNF506Q5JVG8 444 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 FFAR4Q5NUL3 377 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 C1orf122Q6ZSJ8 110 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 RPP25LQ8N5L8 163 aaKnown RBP12.06□□□□□ -0.48
VCAN-211ENST00000513984 KIR3DL3Q8N743 410 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 CLDND2Q8NHS1 167 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 SUN5Q8TC36 379 aa12.06□□□□□ -0.48
VCAN-211ENST00000513984 RPEQ96AT9 228 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms