RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 SAA1P0DJI8 122 aaPredicted RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 CDKN1AP38936 164 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 CAMLGP49069 296 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 OR2B8PP59922 312 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 RAB11AP62491 216 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 DLK1P80370 383 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 PAX2Q02962 417 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 HABP2Q14520 560 aaPredicted RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 BSXQ3C1V8 233 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 C10orf91Q5T1B1 145 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 TMEM182Q6ZP80 229 aaPredicted RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 SSX9Q7RTT3 188 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 VKORC1L1Q8N0U8 176 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 LILRB2Q8N423 598 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 TEX45Q8NA69 505 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 OR4P4Q8NGL7 312 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 TAF15Q92804 592 aaKnown RBP eCLIP6.78□□□□□ -1.32
RNF4-220ENST00000513578 MS4A7Q9GZW8 240 aaPredicted RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 SMDT1Q9H4I9 107 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 HEYLQ9NQ87 328 aaPredicted RBP6.78□□□□□ -1.32
RNF4-220ENST00000513578 UQCC1Q9NVA1 299 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 ZNRD1Q9P1U0 126 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 OR51B2Q9Y5P1 312 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 KPTNQ9Y664 436 aa6.78□□□□□ -1.32
RNF4-220ENST00000513578 TNCP24821 2201 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 ADGRG4Q8IZF6 3080 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 TEX50A0A1B0GTY4 177 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 ODF3BA8MYP8 253 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 OOSP1A8MZH6 123 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 H7C2Y5 167 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 NDUFS8O00217 210 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 ENSAO43768 121 aaKnown RBP6.77□□□□□ -1.33
RNF4-220ENST00000513578 MPDU1O75352 247 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 HBE1P02100 147 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 CD5P06127 495 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 CRYGBP07316 175 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 PAX1P15863 534 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 MAS1LP35410 378 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 SNCAP37840 140 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 PDLIM4P50479 330 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 DIAPH2-AS1Q14236 149 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 VMA21Q3ZAQ7 101 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 AKR1C8PQ5T2L2 129 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 SLC25A24Q6NUK1 477 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 THNSL2Q86YJ6 484 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 CCDC28AQ8IWP9 274 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 MBD3L1Q8WWY6 194 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 HARBI1Q96MB7 349 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 LINC00052Q96N35 136 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 SCRT1Q9BWW7 348 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 HRH4Q9H3N8 390 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 ENY2Q9NPA8 101 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 WDR83OSQ9Y284 106 aa6.77□□□□□ -1.33
RNF4-220ENST00000513578 HRNRQ86YZ3 2850 aaPredicted RBP6.77□□□□□ -1.33
RNF4-220ENST00000513578 IGHV1-3A0A0C4DH29 117 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 A0A1W2PN81 502 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 TMEM218A2RU14 115 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 NDUFS7O75251 213 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 TSPAN15O95858 294 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 IFNA10P01566 189 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 MBP02144 154 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 PRH1P02810 166 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 HTR1DP28221 377 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 CHRNA7P36544 502 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 CEACAM3P40198 252 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 HOXA1P49639 335 aaPredicted RBP6.76□□□□□ -1.33
RNF4-220ENST00000513578 DVL1P1P54792 670 aaPredicted RBP6.76□□□□□ -1.33
RNF4-220ENST00000513578 LMO4P61968 165 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 RPS16P62249 146 aaKnown RBP6.76□□□□□ -1.33
RNF4-220ENST00000513578 RPL8P62917 257 aaKnown RBP6.76□□□□□ -1.33
RNF4-220ENST00000513578 RUNX1Q01196 453 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 TUSC1Q2TAM9 212 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 C2orf83Q53S99 150 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 TPTE2P1Q5T6R2 138 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 OR8G2PQ6IF36 304 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 HCP5Q6MZN7 132 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 SPSB3Q6PJ21 355 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 ETV3LQ6ZN32 361 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 SLC24A4Q8NFF2 622 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 BPIFCQ8NFQ6 507 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 OR1L8Q8NGR8 309 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 TMEM170AQ8WVE7 144 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 SIRPDQ9H106 197 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 PLEKHA3Q9HB20 300 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 NDUFA4L2Q9NRX3 87 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 DPM3Q9P2X0 92 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 ONECUT1Q9UBC0 465 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 CARHSP1Q9Y2V2 147 aaKnown RBP6.76□□□□□ -1.33
RNF4-220ENST00000513578 INSIG2Q9Y5U4 225 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 ARHGAP32A7KAX9 2087 aa6.76□□□□□ -1.33
RNF4-220ENST00000513578 IGHV2-70DA0A0C4DH43 119 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 A0A1W2PPI3 338 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 VWC2LB2RUY7 222 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 C17orf112F2Z3M2 114 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RNASEK-C17orf49H0YIS7 233 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 RRHO14718 337 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 NDUFS6O75380 124 aaKnown RBP6.75□□□□□ -1.33
RNF4-220ENST00000513578 FOXH1O75593 365 aa6.75□□□□□ -1.33
RNF4-220ENST00000513578 IGHV4-39P01824 125 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms