RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 GZMHP20718 246 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 FCGR2CP31995 323 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 ZNF674Q2M3X9 581 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 UTF1Q5T230 341 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 Q6ZPA2 131 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 HSD17B11Q8NBQ5 300 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 LEAP2Q969E1 77 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 OR10C1Q96KK4 312 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 C20orf24Q9BUV8 137 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 GPR61Q9BZJ8 451 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 TMEM133Q9H2Q1 129 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 TMEM242Q9NWH2 141 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 IDI2-AS1Q9NZ38 188 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 FBXL17Q9UF56 701 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 PITPNC1Q9UKF7 332 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV2-26A0A0B4J1V2 119 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 SMCO3A2RU48 225 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 NPFFO15130 113 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 NAPSAO96009 420 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 GSTP1P09211 210 aaKnown RBP13.4□□□□□ -0.26
HMGCL-209ENST00000513148 SAA4P35542 130 aa13.4□□□□□ -0.26
HMGCL-209ENST00000513148 SUPT4H1P63272 117 aaKnown RBP13.4□□□□□ -0.26
HMGCL-209ENST00000513148 IGHV3-43A0A0B4J1X8 118 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 A0A0U1RQK1 487 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 C15orf65H3BRN8 121 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 IGHV3-43DP0DP04 118 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 P2RY1P47900 373 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 CAMLGP49069 296 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 TNFRSF9Q07011 255 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 GAGE1Q13065 139 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 ARFRP1Q13795 201 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 AKR1C8PQ5T2L2 129 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 LHFPL1Q86WI0 220 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 OR1L1Q8NH94 360 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 HIPK2Q9H2X6 1198 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 MBNL3Q9NUK0 354 aaKnown RBP13.39□□□□□ -0.27
HMGCL-209ENST00000513148 KCNIP1Q9NZI2 227 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 NPIPB11E5RHQ5 1161 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 SPINT2O43291 252 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 HBZP02008 142 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 ECI1P42126 302 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 ANKRD55Q3KP44 614 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 FAM53AQ6NSI3 398 aaPredicted RBP13.39□□□□□ -0.27
HMGCL-209ENST00000513148 ABHD12Q8N2K0 398 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 GVQW1Q8N7I0 195 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
HMGCL-209ENST00000513148 CLEC7AQ9BXN2 247 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF286AQ9HBT8 521 aa13.39□□□□□ -0.27
HMGCL-209ENST00000513148 SERPINE3A8MV23 424 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 SDCBPO00560 298 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-209ENST00000513148 GCGP01275 180 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 SLC35E3Q7Z769 313 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 SIGLECL1Q8N7X8 197 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 Q8WTZ3 238 aa13.38□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF48Q96MX3 618 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-209ENST00000513148 RTBDNQ9BSG5 229 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-209ENST00000513148 RIMS4Q9H426 269 aaPredicted RBP13.38□□□□□ -0.27
HMGCL-209ENST00000513148 MARCH11A6NNE9 402 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 GNG10P50151 68 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 LGALS4P56470 323 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 BPIFB3P59826 476 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 GGNBP1Q5YKI7 109 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 TRAT1Q6PIZ9 186 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 C9orf139Q6ZV77 190 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 IL1F10Q8WWZ1 152 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 LINC00574Q9H8X3 128 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 ZNRD1Q9P1U0 126 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 OR5AC1P0C628 307 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 SRSF2Q01130 221 aaKnown RBP13.37□□□□□ -0.27
HMGCL-209ENST00000513148 ARL6IP1Q15041 203 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 USF2Q15853 346 aaPredicted RBP13.37□□□□□ -0.27
HMGCL-209ENST00000513148 MOB1BQ7L9L4 216 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 LHFPL4Q7Z7J7 247 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 OR11H6Q8NGC7 330 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 OR10V1Q8NGI7 309 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 HIST1H2BLQ99880 126 aa13.37□□□□□ -0.27
HMGCL-209ENST00000513148 JMJD1CQ15652 2540 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 ODF3BA8MYP8 253 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 E5RGE8 158 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 H3BQ15 152 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 METTL15P1P0C7V9 234 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 TAGLN2P37802 199 aaKnown RBP13.36□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF616Q08AN1 781 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF880Q6PDB4 577 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 PRIMA1Q86XR5 153 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 OR10G4Q8NGN3 311 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 ZNF418Q8TF45 676 aaPredicted RBP13.36□□□□□ -0.27
HMGCL-209ENST00000513148 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 Q9N2K0 584 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 GNG12Q9UBI6 72 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 NSG2Q9Y328 171 aa13.36□□□□□ -0.27
HMGCL-209ENST00000513148 LINC00614P0C842 121 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 FABP4P15090 132 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 RND2P52198 227 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 S100A10P60903 97 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 SLC9A3R2Q15599 337 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 COA6Q5JTJ3 125 aaKnown RBP13.35□□□□□ -0.27
HMGCL-209ENST00000513148 ZDHHC16Q969W1 377 aa13.35□□□□□ -0.27
HMGCL-209ENST00000513148 DUX5Q96PT3 197 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms