RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 GNB3P16520 340 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 EVI2AP22794 236 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 PTH2RP49190 550 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 NDUFA6P56556 154 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 LCN6P62502 163 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 HGFACQ04756 655 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 PRDX4Q13162 271 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 BATFQ16520 125 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 KHDC3LQ587J8 217 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 PRSS54Q6PEW0 395 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 IL34Q6ZMJ4 242 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 GTF2H5Q6ZYL4 71 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 HIST3H2BBQ8N257 126 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 TCEANCQ8N8B7 351 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR52E2Q8NGJ4 325 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 VN1R17PQ8TDU5 208 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 BBC3Q96PG8 261 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 C19orf25Q9UFG5 118 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 CSAG2Q9Y5P2 127 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 COL6A6A6NMZ7 2263 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 TENM4Q6N022 2769 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 TMEM269A0A1B0GVZ9 245 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF705EA8MWA4 302 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 KBTBD11O94819 623 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 HKR1P10072 659 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 SELENOPP49908 381 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 MLANAQ16655 118 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 GLT8D1Q68CQ7 371 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 EIF5AL1Q6IS14 154 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF433Q8N7K0 673 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 CNRIP1Q96F85 164 aaPredicted RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 PHYHIPLQ96FC7 376 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC35E1Q96K37 410 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 TM2D1Q9BX74 207 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR2H1Q9GZK4 316 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 SH3BGRL3Q9H299 93 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 ISG20L2Q9H9L3 353 aaKnown RBP4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 CBLN4Q9NTU7 201 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 VDAC3Q9Y277 283 aa4.11□□□□□ -1.75
TRAPPC11-208ENST00000511955 TRAV38-1A0A0B4J264 116 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 LOC102725191A0A1B0GVB3 256 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 hADV38S2A0JD32 116 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF724A8MTY0 619 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SULT2B1O00204 365 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 MRPS12O15235 138 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF682O95780 498 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 HPRT1P00492 218 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 NGFP01138 241 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 P01737 135 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 GGT1P19440 569 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 MPGP29372 298 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SRIP30626 198 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 G6PCP35575 357 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 NCBP2P52298 156 aaKnown RBP eCLIP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC35A1P78382 337 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 HERPUD1Q15011 391 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 KIAA0040Q15053 153 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 GSG1Q2KHT4 349 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 LINC00303Q3SY05 128 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC48A1Q6P1K1 146 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 GLIPR1L1Q6UWM5 242 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 IGFL2Q6UWQ7 119 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 CDC20BQ86Y33 519 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SLC25A46Q96AG3 418 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 NRIP2Q9BQI9 281 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 NAA38Q9BRA0 125 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 RHNO1Q9BSD3 238 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 EMC6Q9BV81 110 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 DEFB126Q9BYW3 111 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 GABARAPL1Q9H0R8 117 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR52D1Q9H346 318 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ASF1BQ9NVP2 202 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ANXA10Q9UJ72 324 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 HELZ2Q9BYK8 2649 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 IGKV3D-11A0A0A0MRZ8 115 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 TIMM23O14925 209 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF354AO60765 605 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 CRLF1O75462 422 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SMIM17P0DL12 118 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 KLK2P20151 261 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 B3GALT5-AS1P59052 145 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 RHOGP84095 191 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 TNFAIP6P98066 277 aaPredicted RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 RPL18AQ02543 176 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 HMGN3Q15651 99 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 CNIH2Q6PI25 160 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 PCSK4Q6UW60 755 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 HRCT1Q6UXD1 115 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 PLPP5Q8NEB5 264 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR5A2Q8NGI9 324 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR5A1Q8NGJ0 315 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 OR10D3Q8NH80 312 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 BLNKQ8WV28 456 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SRSF12Q8WXF0 261 aaKnown RBP4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 DNAJA3Q96EY1 480 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 GALNT14Q96FL9 552 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 IMMP1LQ96LU5 166 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 PITX2Q99697 317 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 SEC61A2Q9H9S3 476 aa4.1□□□□□ -1.75
TRAPPC11-208ENST00000511955 ZNF331Q9NQX6 463 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms