RNA–Protein interactions for RNA: ENST00000511748.5

NR1I3-229, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-229ENST00000511748 NUDCD2Q8WVJ2 157 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 TMED6Q8WW62 240 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 SRSF12Q8WXF0 261 aaKnown RBP4.94□□□□□ -1.62
NR1I3-229ENST00000511748 CXorf58Q96LI9 332 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 HRH4Q9H3N8 390 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 C5orf66Q9H5L9 145 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 ISG20L2Q9H9L3 353 aaKnown RBP4.94□□□□□ -1.62
NR1I3-229ENST00000511748 CHMP1AQ9HD42 196 aaPredicted RBP4.94□□□□□ -1.62
NR1I3-229ENST00000511748 POMPQ9Y244 141 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 UFC1Q9Y3C8 167 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
NR1I3-229ENST00000511748 TRBV7-1A0A0A6YYK4 115 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 TRBV5-5A0A0J9YX44 114 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 A0A1B0GVY2 172 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 TMEM213A2RRL7 107 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 OR4C46A6NHA9 309 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 TSPAN4O14817 238 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 IGLV2-23P01705 113 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 C8orf88P0DMB2 117 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 ARL3P36405 182 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 CEACAM6P40199 344 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 HLA-DRB3P79483 266 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 PRSS8Q16651 343 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 SOHLH1Q5JUK2 328 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 SIGIRRQ6IA17 410 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 MMD2Q8IY49 270 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 UXS1Q8NBZ7 420 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 VSTM2AQ8TAG5 236 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 EEF1AKMT3Q96AZ1 226 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 CENPNQ96H22 339 aaPredicted RBP4.93□□□□□ -1.62
NR1I3-229ENST00000511748 ABHD14BQ96IU4 210 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 SLC29A1Q99808 456 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 AP4S1Q9Y587 144 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 DNAH6Q9C0G6 4158 aa4.93□□□□□ -1.62
NR1I3-229ENST00000511748 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 ZNF320A2RRD8 509 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 MPTX1A8MV57 137 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 E9PI62 339 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 M0R1X1 148 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 OGG1O15527 345 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 CYB5BO43169 146 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 BAG2O95816 211 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 P0DMU3 169 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 MYL12AP19105 171 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 SRMP19623 302 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 DCKP27707 260 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 POLR2IP36954 125 aaKnown RBP4.92□□□□□ -1.62
NR1I3-229ENST00000511748 TAS2R43P59537 309 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 EWSR1Q01844 656 aaKnown RBP eCLIP4.92□□□□□ -1.62
NR1I3-229ENST00000511748 PJVKQ0ZLH3 352 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 TNXAQ16473 311 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 KLK9Q2XQG4 91 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 TMEM41BQ5BJD5 291 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 LIPKQ5VXJ0 399 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 BTNL8Q6UX41 500 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 DRAXINQ8NBI3 349 aaPredicted RBP4.92□□□□□ -1.62
NR1I3-229ENST00000511748 OR13C5Q8NGS8 318 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 ACOT12Q8WYK0 555 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 ATP6V0BQ99437 205 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 RARRES2Q99969 163 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 TM2D1Q9BX74 207 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 TMEM59Q9BXS4 323 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 PARP12Q9H0J9 701 aaKnown RBP4.92□□□□□ -1.62
NR1I3-229ENST00000511748 CSTL1Q9H114 145 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 BANF2Q9H503 90 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 C12orf4Q9NQ89 552 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 PLEKHJ1Q9NW61 149 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 PPP1R14DQ9NXH3 145 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 BABAM2Q9NXR7 383 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 THYN1Q9P016 225 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 FBXL17Q9UF56 701 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 MLXQ9UH92 298 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 KLK9Q9UKQ9 250 aa4.92□□□□□ -1.62
NR1I3-229ENST00000511748 KRTAP29-1A8MX34 341 aaPredicted RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 PPP5D1E7EU14 171 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 ATP8B1O43520 1251 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 OR2C1O95371 312 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 CD5P06127 495 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 PRSS2P07478 247 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 LIMS3P0CW19 117 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 LIMS4P0CW20 117 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 MAS1LP35410 378 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 GTF2A1P52655 376 aaPredicted RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 MFAP2P55001 183 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 BRWD1-AS2P59051 145 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 RPS27AP62979 156 aaKnown RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 IRF3Q14653 427 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 CDK10Q15131 360 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 CCDC197Q8NCU1 140 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 OR4A4PQ8NGN8 299 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 SETD6Q8TBK2 473 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 URM1Q9BTM9 101 aaKnown RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 FAAP24Q9BTP7 215 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 FGF20Q9NP95 211 aaPredicted RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 DAZ1Q9NQZ3 744 aaKnown RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 APLNQ9ULZ1 77 aa4.91□□□□□ -1.62
NR1I3-229ENST00000511748 MRPS7Q9Y2R9 242 aaKnown RBP4.91□□□□□ -1.62
NR1I3-229ENST00000511748 TRAV8-7A0A075B6U6 113 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms