RNA–Protein interactions for RNA: ENST00000511676.5

NR1I3-228, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-228ENST00000511676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.35□□□□□ -1.23
NR1I3-228ENST00000511676 A0A1W2PPI3 338 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 RNASEK-C17orf49H0YIS7 233 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 SCGB1D2O95969 90 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 AVPP01185 164 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 ARG1P05089 322 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 MAS1LP35410 378 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 DYNLT3P51808 116 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 LGALS4P56470 323 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 UBE2KP61086 200 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
NR1I3-228ENST00000511676 VAMP2P63027 116 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 OPCMLQ14982 345 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 VMA21Q3ZAQ7 101 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 OR2B11Q5JQS5 317 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 CXorf66Q5JRM2 361 aaPredicted RBP7.34□□□□□ -1.23
NR1I3-228ENST00000511676 OR4A47Q6IF82 309 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 SHISA2Q6UWI4 295 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 Q6ZRM9 215 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 OR2C3Q8N628 320 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 TEX45Q8NA69 505 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 OR4A16Q8NH70 328 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 STOML3Q8TAV4 291 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 TMEM167AQ8TBQ9 72 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 TBX15Q96SF7 602 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 SIRT7Q9NRC8 400 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 TMEM140Q9NV12 185 aa7.34□□□□□ -1.23
NR1I3-228ENST00000511676 LSM5Q9Y4Y9 91 aaKnown RBP7.34□□□□□ -1.23
NR1I3-228ENST00000511676 TMEM89A2RUT3 159 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 H7C2Y5 167 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 SHOXO15266 292 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 JTBO76095 146 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 KBTBD11O94819 623 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 IFNA7P01567 189 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 IGKV1-16P04430 117 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 HKR1P10072 659 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 COX7A1P24310 79 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 AP2S1P53680 142 aaPredicted RBP7.33□□□□□ -1.24
NR1I3-228ENST00000511676 POLR2GP62487 172 aaKnown RBP eCLIP7.33□□□□□ -1.24
NR1I3-228ENST00000511676 RPP30P78346 268 aaKnown RBP7.33□□□□□ -1.24
NR1I3-228ENST00000511676 EBI3Q14213 229 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 STX12Q86Y82 276 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 THNSL2Q86YJ6 484 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
NR1I3-228ENST00000511676 OR8H1Q8NGG4 311 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 CLCC1Q96S66 551 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 SRSF8Q9BRL6 282 aaKnown RBP7.33□□□□□ -1.24
NR1I3-228ENST00000511676 MMP26Q9NRE1 261 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 NBEAL1Q6ZS30 2694 aa7.33□□□□□ -1.24
NR1I3-228ENST00000511676 A0A1B0GUS0 222 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 UPK2O00526 184 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 CHST1O43916 411 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 SSSCA1O60232 199 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 TSPAN9O75954 239 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 VENTXO95231 258 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 SAA1P0DJI8 122 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-228ENST00000511676 BRS3P32247 399 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 SULT1A1P50225 295 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 HILS1P60008 231 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 HSPE1P61604 102 aaKnown RBP7.32□□□□□ -1.24
NR1I3-228ENST00000511676 HBG1P69891 147 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 HBG2P69892 147 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 ZNF266Q14584 549 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 AANATQ16613 207 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 EIF5AL1Q6IS14 154 aaKnown RBP7.32□□□□□ -1.24
NR1I3-228ENST00000511676 TEX261Q6UWH6 196 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 HSD17B13Q7Z5P4 300 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-228ENST00000511676 MMD2Q8IY49 270 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 DTD1Q8TEA8 209 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 CFHR4Q92496 578 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 PARD6GQ9BYG4 376 aaPredicted RBP7.32□□□□□ -1.24
NR1I3-228ENST00000511676 PLSCR3Q9NRY6 295 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 ZNRD1Q9P1U0 126 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 AUP1Q9Y679 476 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 U3KQ87 197 aa7.32□□□□□ -1.24
NR1I3-228ENST00000511676 BORCS7-ASMTA0A0B4J1R7 106 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 IGHV1-69DA0A0B4J2H0 117 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 A0A1W2PN81 502 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 MSGN1A6NI15 193 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 TIMM23O14925 209 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 NPFFO15130 113 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 RBMXL2O75526 392 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 DFFBO76075 338 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 NDUFA3O95167 84 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 MOSP00540 346 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 IGLV2-23P01705 113 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 IGHV1-69P01742 117 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 OR9G9P0C7N8 305 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 TPT1P13693 172 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 CHRNA7P36544 502 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 REG1BP48304 166 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 CAV2P51636 162 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 PAX9P55771 341 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 LINC00205P59089 165 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 RPS16P62249 146 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 RPL8P62917 257 aaKnown RBP7.31□□□□□ -1.24
NR1I3-228ENST00000511676 PRCDQ00LT1 54 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 IFITM2Q01629 132 aa7.31□□□□□ -1.24
NR1I3-228ENST00000511676 EWSR1Q01844 656 aaKnown RBP eCLIP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms