RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 OR1P1Q8NH06 330 aa11.72□□□□□ -0.53
AP003555.1-202ENST00000511013 TMEM170AQ8WVE7 144 aa11.72□□□□□ -0.53
AP003555.1-202ENST00000511013 GAFA1Q96PS6 74 aa11.72□□□□□ -0.53
AP003555.1-202ENST00000511013 A0A1W2PPQ1 181 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 IGHV1-46P01743 117 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 IL6RP08887 468 aaPredicted RBP11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 DEFA4P12838 97 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 HIST1H1BP16401 226 aaKnown RBP11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 RPL29P47914 159 aaKnown RBP11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 ATP5G3P48201 142 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 NUBP1P53384 320 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 RTP5Q14D33 572 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 FAM201AQ5SY85 155 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 C1orf229Q6ZS94 237 aaPredicted RBP11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 LEAP2Q969E1 77 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 ZNF257Q9Y2Q1 563 aa11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 CNOT1A5YKK6 2376 aaKnown RBP11.71□□□□□ -0.54
AP003555.1-202ENST00000511013 TRAV20A0A0B4J274 112 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 SELLP14151 372 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 RTL8BQ17RB0 113 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 PACRGQ96M98 296 aaPredicted RBP11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 HIST1H2BLQ99880 126 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 ELOVL1Q9BW60 279 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 FKBP11Q9NYL4 201 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 OR51B2Q9Y5P1 312 aa11.7□□□□□ -0.54
AP003555.1-202ENST00000511013 hADV38S2A0JD32 116 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 XKRY2A2RUG3 117 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 DVL1O14640 695 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 CD40P25942 277 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 CHRNA7P36544 502 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 ACTL10Q5JWF8 245 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 DEFB108BQ8NET1 73 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 NUP37Q8NFH4 326 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 OR5T1Q8NG75 326 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 FAM57AQ8TBR7 257 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 CCL13Q99616 98 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 RPUSD1Q9UJJ7 312 aaKnown RBP11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 MDFIC2A0A1B0GVS7 189 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 A8MXE2 369 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 UPK2O00526 184 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 CA2P00918 260 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 GCHFRP30047 84 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 FOXL1Q12952 345 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 ARSJQ5FYB0 599 aaPredicted RBP11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 TEX36Q5VZQ5 186 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 SLC25A48Q6ZT89 311 aaKnown RBP11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 RPRMLQ8N4K4 120 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 RNASEH2CQ8TDP1 164 aaKnown RBP11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 UHRF2Q96PU4 802 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 TP53TG5Q9Y2B4 290 aa11.69□□□□□ -0.54
AP003555.1-202ENST00000511013 NKX6-3A6NJ46 265 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 J3QR06 171 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 GATCO43716 136 aaKnown RBP11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 EFNB3Q15768 340 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 LURAP1LQ8IV03 231 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 RBMXL3Q8N7X1 1067 aaKnown RBP11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 STPG3Q8N7X2 389 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 OR5R1Q8NH85 324 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 ZCCHC14Q8WYQ9 949 aaKnown RBP11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 NEUROG1Q92886 237 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 C1orf159Q96HA4 380 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 PLEKHA3Q9HB20 300 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 SLC35D1Q9NTN3 355 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 DYSFO75923 2080 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 PLCE1Q9P212 2302 aa11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 RAI1Q7Z5J4 1906 aaPredicted RBP11.68□□□□□ -0.54
AP003555.1-202ENST00000511013 TNFRSF1AP19438 455 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PDLIM4P50479 330 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRCDQ00LT1 54 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 MEF2CQ06413 473 aaPredicted RBP11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 FAM27E3Q08E93 113 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 UTF1Q5T230 341 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 FAM78BQ5VT40 261 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 TMEM108Q6UXF1 575 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 TCF23Q7RTU1 214 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 SFRP2Q96HF1 295 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 HINT2Q9BX68 163 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 LINC00312Q9Y6C7 94 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 ARL2-SNX15V9GYD0 113 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 MUC3AQ02505 3323 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 ICE1Q9Y2F5 2266 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 TTC28Q96AY4 2481 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 GNG10P50151 68 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRR20EP86478 221 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRR20CP86479 221 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRR20DP86480 221 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRR20BP86481 221 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 PRR20AP86496 221 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 CLEC12BQ2HXU8 276 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 FAM209BQ5JX69 171 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 DUX4L9Q6RFH8 374 aaPredicted RBP11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 TMEM144Q7Z5S9 345 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 TMEM37Q8WXS4 190 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 GAL3ST2Q9H3Q3 398 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 FUT9Q9Y231 359 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 LY96Q9Y6Y9 160 aa11.67□□□□□ -0.54
AP003555.1-202ENST00000511013 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 124 ms