RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 RPL8P62917 257 aaKnown RBP12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 DHODHQ02127 395 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 IZUMO4Q1ZYL8 232 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 TMEM128Q5BJH2 165 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 C19orf54Q5BKX5 351 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 SELENOHQ8IZQ5 122 aaKnown RBP12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 OR4A5Q8NH83 315 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 CHPT1Q8WUD6 406 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 NUDT15Q9NV35 164 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 ZNF580Q9UK33 172 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 KCNIP3Q9Y2W7 256 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 NSG2Q9Y328 171 aa12.17□□□□□ -0.46
SH3TC1-220ENST00000511002 TRAV6A0A075B6T7 132 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 TRAV41A0A0B4J266 112 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 A0A0G2JRQ6 117 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 SFT2D2O95562 160 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 CDS2O95674 445 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 P0C879 139 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 VDAC1P21796 283 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 AKR1C2P52895 323 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 CRIP2P52943 208 aaPredicted RBP12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 OR2B8PP59922 312 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 CFHR3Q02985 330 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 ANKRD55Q3KP44 614 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 TMEM268Q5VZI3 342 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 C18orf65Q6ZTR6 163 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 H2BFWTQ7Z2G1 175 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 SRSF12Q8WXF0 261 aaKnown RBP12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 TMEM56Q96MV1 263 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 TMEM56-RWDD3S4R434 201 aa12.16□□□□□ -0.46
SH3TC1-220ENST00000511002 PRKDCP78527 4128 aaKnown RBP12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 A0A1B0GW64 132 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 DBX1A6NMT0 343 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 E7EUB6 86 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 ACTL6BO94805 426 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 APELAP0DMC3 54 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 ANXA3P12429 323 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 DEFA1P59665 94 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 DEFA3P59666 94 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 UBE2MP61081 183 aaKnown RBP12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 KHDC1LQ5JSQ8 128 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 SAMD5Q5TGI4 173 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 ASPHD1Q5U4P2 390 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 NRARPQ7Z6K4 114 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 ZNF695Q8IW36 515 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 SLC35G3Q8N808 338 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 LFNGQ8NES3 379 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 CASTOR1Q8WTX7 329 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 RBPMSQ93062 196 aaKnown RBP12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 NUBP2Q9Y5Y2 271 aa12.15□□□□□ -0.46
SH3TC1-220ENST00000511002 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 MSGN1A6NI15 193 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 CGB1A6NKQ9 187 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 HLA-AP01891 365 aaKnown RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 OR4E1P0C645 316 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 PPIFP30405 207 aaKnown RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 MAS1LP35410 378 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 RPL27AP46776 148 aaKnown RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 RAB25P57735 213 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 BEAN1Q3B7T3 259 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 PDLIM3Q53GG5 364 aaPredicted RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 UNQ5815/PRO19632Q6UWF5 114 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 CADM3Q8N126 398 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 OR4X2Q8NGF9 303 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 RNASE11Q8TAA1 199 aaKnown RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 PHB2Q99623 299 aa12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
SH3TC1-220ENST00000511002 A0A1W2PN81 502 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 HMX3A6NHT5 357 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 TEX22C9J3V5 150 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 SOX15O60248 233 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 SNAPC5O75971 98 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 ATG12O94817 140 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 PRB2P02812 416 aaPredicted RBP12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 H2AFB2P0C5Z0 115 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 SPNP16150 400 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 CHRNA7P36544 502 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 SLC35B1P78383 322 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 SRPXP78539 464 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 DHRS2Q13268 280 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 C4orf46Q504U0 113 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 OXLD1Q5BKU9 147 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 LCNL1Q6ZST4 164 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 LYG2Q86SG7 212 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 LGI3Q8N145 548 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 MINDY2Q8NBR6 621 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 OR4F17Q8NGA8 305 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 OR52B4Q8NGK2 314 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 IL22RA2Q969J5 263 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 RRNAD1Q96FB5 475 aaKnown RBP12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 FYTTD1Q96QD9 318 aaKnown RBP12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 OR4F4Q96R69 305 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 GON7Q9BXV9 100 aa12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 FOXA2Q9Y261 457 aaPredicted RBP12.13□□□□□ -0.47
SH3TC1-220ENST00000511002 A0A0B4J293 547 aa12.12□□□□□ -0.47
SH3TC1-220ENST00000511002 TEX50A0A1B0GTY4 177 aa12.12□□□□□ -0.47
SH3TC1-220ENST00000511002 IGHG4P01861 327 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms