RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 WNT10AQ9GZT5 417 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 RPS10P5Q9NQ39 176 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 NPDC1Q9NQX5 325 aaPredicted RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 KIF26BQ2KJY2 2108 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 MAP1LC3B2A6NCE7 125 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 IGHV3-11P01762 117 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 IGHV3-23P01764 117 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 APOC3P02656 99 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 CCKARP32238 428 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 IZUMO4Q1ZYL8 232 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 IL17RELQ6ZVW7 336 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 RNASEH2CQ8TDP1 164 aaKnown RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 MAP1LC3BQ9GZQ8 125 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 RPL7P18124 248 aaKnown RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 FCGR2BP31994 310 aaPredicted RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 HAGHQ16775 308 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 Q6ZNX1 250 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 C1orf122Q6ZSJ8 110 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 BPIFA4PQ86YQ2 179 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 C11orf44Q8N8P7 122 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 MCRIP2Q9BUT9 160 aaKnown RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 RP1L1Q8IWN7 2480 aaPredicted RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 SNAPINO95295 136 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 CXorf1O96002 111 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 S100A8P05109 93 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 LINC00869P0C866 280 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 GPR183P32249 361 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PSG5Q15238 335 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 ASCL4Q6XD76 172 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PAXXQ9BUH6 204 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PPP1R3EQ9H7J1 279 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 MANBALQ9NQG1 85 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 SAP30O75446 220 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 DLK1P80370 383 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 RHOGP84095 191 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 PRR27Q6MZM9 219 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 COMMD1Q8N668 190 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 RNF166Q96A37 237 aaPredicted RBP4.22□□□□□ -1.73
PHF3-210ENST00000509876 SMIM8Q96KF7 97 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 TXN2Q99757 166 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 C5orf66Q9H5L9 145 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 BET1LQ9NYM9 111 aa4.22□□□□□ -1.73
PHF3-210ENST00000509876 IGHV4-61A0A0C4DH41 118 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 FAM223BA6NKX1 122 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 ZNF79Q15937 498 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 TOR2AQ5JU69 321 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 FAM120AOSQ5T036 256 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 TMEM78Q5T7P6 136 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 FAM223AQ8IWN6 122 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 PUS1Q9Y606 427 aaKnown RBP eCLIP4.21□□□□□ -1.73
PHF3-210ENST00000509876 ATG2AQ2TAZ0 1938 aa4.21□□□□□ -1.73
PHF3-210ENST00000509876 A0A1B0GUS0 222 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 SERTM2A0A1B0GWG4 89 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 CHEK1O14757 476 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 MT-ND4LP03901 98 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 HKR1P10072 659 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 DUTP33316 252 aaKnown RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 TCTE3Q8IZS6 198 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 COQ2Q96H96 371 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 USMG5Q96IX5 58 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 ZNF331Q9NQX6 463 aaPredicted RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 C15orf61A6NNL5 157 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 GUSBP1Q15486 140 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 OR51G1Q8NGK1 321 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 RXFP4Q8TDU9 374 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 TMEM158Q8WZ71 300 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 GPR82Q96P67 336 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 IFI27L2Q9H2X8 130 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 TTC28Q96AY4 2481 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 NDUFS7O75251 213 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 HTN1P15515 57 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 LOXP28300 417 aaPredicted RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 C5orf64Q2M2E5 130 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 DPPA3Q6W0C5 159 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 KLHL30-AS1Q8NEE0 82 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 DDB2Q92466 427 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 MARC2Q969Z3 335 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 FAM103A1Q9BTL3 118 aaKnown RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 PXMP4Q9Y6I8 212 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 MAP1BP46821 2468 aaKnown RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 H0YJW9 148 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 ITGB1BP1O14713 200 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 HOXA3O43365 443 aaPredicted RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 GGCTO75223 188 aaKnown RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 DEDDO75618 318 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 IL4P05112 153 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 CD5P06127 495 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 LOXL1Q08397 574 aaPredicted RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 RPUSD4Q96CM3 377 aaKnown RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 TP53RKQ96S44 253 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 GPHA2Q96T91 129 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 C19orf24Q9BVV8 132 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 ELOA3CA0A087WX78 387 aaPredicted RBP4.21□□□□□ -1.74
PHF3-210ENST00000509876 A0A0A6YYD4 124 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 OR4C46A6NHA9 309 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 E9PQ18 207 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 F8VVB4 439 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 F8VWA3 439 aa4.21□□□□□ -1.74
PHF3-210ENST00000509876 CLN5O75503 358 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms