RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CT45A5P0DMU8 189 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 CT45A7P0DMV0 189 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 TMEM11P17152 192 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 RPL23AP62750 156 aaKnown RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 CYCSP99999 105 aaKnown RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 EGFEM1PQ0D2K5 195 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 ZNF816Q0VGE8 651 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 HNF4GQ14541 408 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 POU2AF1Q16633 256 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 ZFP69Q49AA0 526 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 DEFB121Q5J5C9 76 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 SPAG16Q8N0X2 631 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 OR5AN1Q8NGI8 311 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 OR2T35Q8NGX2 323 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 TCTEX1D2Q8WW35 142 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 NOL4LQ96MY1 436 aaPredicted RBP11.49□□□□□ -0.57
HMGCL-208ENST00000509389 PLEKHA2Q9HB19 425 aa11.49□□□□□ -0.57
HMGCL-208ENST00000509389 COL7A1Q02388 2944 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 FGF16O43320 207 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 PITX3O75364 302 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 IGKV1D-33P01593 117 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 IGKV1-33P01594 117 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 SERPINE2P07093 398 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 LYL1P12980 280 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 LINC00205P59089 165 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 TAGLNQ01995 201 aaKnown RBP11.48□□□□□ -0.57
HMGCL-208ENST00000509389 AARDQ4LEZ3 155 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 Q5BKY6 102 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 C18orf65Q6ZTR6 163 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 NOXA1Q86UR1 476 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 ZNF695Q8IW36 515 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 FAM219AQ8IW50 185 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 OR8H3Q8N146 312 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 ZBTB8BQ8NAP8 495 aaPredicted RBP11.48□□□□□ -0.57
HMGCL-208ENST00000509389 OR11H4Q8NGC9 324 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 SEC22AQ96IW7 307 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 NABP2Q9BQ15 211 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 COA4Q9NYJ1 87 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 LINC00527Q9UJ94 153 aa11.48□□□□□ -0.57
HMGCL-208ENST00000509389 TXNL1O43396 289 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 S1PR2O95136 353 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 IFNA21P01568 189 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 IL3RAP26951 378 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 OR4D5Q8NGN0 318 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 OR10X1Q8NGY0 326 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 PPP1R1CQ8WVI7 109 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 HYLS1Q96M11 299 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 SPIN2AQ99865 258 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 SPIN2BQ9BPZ2 258 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 MRPL20Q9BYC9 149 aaKnown RBP11.47□□□□□ -0.57
HMGCL-208ENST00000509389 PRELID3BQ9Y3B1 194 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 DNAH9Q9NYC9 4486 aa11.47□□□□□ -0.57
HMGCL-208ENST00000509389 NBEAL2Q6ZNJ1 2754 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 H0YJW9 148 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 SMLR1H3BR10 107 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 HPRT1P00492 218 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 IGHG2P01859 326 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 LPAR6P43657 344 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 IAH1Q2TAA2 248 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-208ENST00000509389 C11orf87Q6NUJ2 197 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 C8orf86Q6ZUL3 223 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 DRAXINQ8NBI3 349 aaPredicted RBP11.46□□□□□ -0.57
HMGCL-208ENST00000509389 GPR61Q9BZJ8 451 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 ZFP57Q9NU63 452 aa11.46□□□□□ -0.57
HMGCL-208ENST00000509389 IGHV1-3A0A0C4DH29 117 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 A0A1B0GU03 582 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 C5orf51A6NDU8 294 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 HMSDA8MTL9 139 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 NUDT19A8MXV4 375 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 FCGR3BO75015 233 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 MPC2O95563 127 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 GAPDHP04406 335 aaKnown RBP11.45□□□□□ -0.58
HMGCL-208ENST00000509389 IL6RP08887 468 aaPredicted RBP11.45□□□□□ -0.58
HMGCL-208ENST00000509389 SLC25A4P12235 298 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 MYCNOSP40205 109 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 FGL1Q08830 312 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 EBI3Q14213 229 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 MOB3BQ86TA1 216 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 COMMD1Q8N668 190 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 DPF1Q92782 380 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 PDCD10Q9BUL8 212 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 C11orf1Q9H5F2 150 aa11.45□□□□□ -0.58
HMGCL-208ENST00000509389 IGHV3-72A0A0B4J1Y9 119 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 MARCH11A6NNE9 402 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 H0YIZ8 118 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 ATG12O94817 140 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 RRASP10301 218 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 REG1BP48304 166 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 EIF2B2P49770 351 aaKnown RBP11.44□□□□□ -0.58
HMGCL-208ENST00000509389 SLC35B1P78383 322 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 TMEM177Q53S58 311 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 OR2B11Q5JQS5 317 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 TMEM65Q6PI78 240 aa11.44□□□□□ -0.58
HMGCL-208ENST00000509389 PDPNQ86YL7 162 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms