RNA–Protein interactions for RNA: ENST00000508604.5

NUP54-208, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,671 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-208ENST00000508604 BDKRB1P46663 353 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TFPI2P48307 235 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ZNF140P52738 457 aaPredicted RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 CLDN6P56747 220 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 UBE2NP61088 152 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 HSPE1P61604 102 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 LSM3P62310 102 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 RPS25P62851 125 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 GRB2P62993 217 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 SLC35B1P78383 322 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 BTG2P78543 158 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TNFAIP6P98066 277 aaPredicted RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 PSG4Q00888 419 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 AKR1C1Q04828 323 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 SRYQ05066 204 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TMEM267Q0VDI3 215 aaPredicted RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 PDGFRLQ15198 375 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 RPEL1Q2QD12 228 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 PYDC2Q56P42 97 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 CT45A1Q5HYN5 189 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TEX36Q5VZQ5 186 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR2T2Q6IF00 324 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 LCN8Q6JVE9 175 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 UFSP1Q6NVU6 142 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 Q6ZSR6 202 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 LINC00336Q6ZUF6 198 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ASCL5Q7RTU5 278 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 FAM19A5Q7Z5A7 132 aaPredicted RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 ZNF567Q8N184 647 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR2L13Q8N349 312 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TTC9CQ8N5M4 171 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 FAM24BQ8N5W8 94 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 EID2Q8N6I1 236 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 C20orf203Q8NBC4 194 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 VN1R2Q8NFZ6 395 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR11G2Q8NGC1 345 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR5D16Q8NGK9 328 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR6K6Q8NGW6 343 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR5AK2Q8NH90 309 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 CT45A3Q8NHU0 189 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ZNF675Q8TD23 568 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 BLNKQ8WV28 456 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 MBD3L1Q8WWY6 194 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 BAALCQ8WXS3 180 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TSLPQ969D9 159 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 SLAMF6Q96DU3 332 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ZMYND19Q96E35 227 aaPredicted RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 DIRAS2Q96HU8 199 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 DERL3Q96Q80 235 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TRIB3Q96RU7 358 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ADAT1Q9BUB4 502 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 VAMP8Q9BV40 100 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 COA1Q9GZY4 146 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 POLR2J3Q9H1A7 115 aaKnown RBP1.28□□□□□ -2.2
NUP54-208ENST00000508604 GTSF1LQ9H1H1 148 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ATG5Q9H1Y0 275 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 OR51I2Q9H344 312 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 PRORYQ9H606 182 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 RERGLQ9H628 205 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 CISHQ9NSE2 258 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 FAM206AQ9NX38 181 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 FKBP11Q9NYL4 201 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 GALPQ9UBC7 116 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 ANXA10Q9UJ72 324 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 CES1P1Q9UKY3 287 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 SBF1O95248 1867 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 DOCK5Q9H7D0 1870 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 MYO3AQ8NEV4 1616 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 TRIP11Q15643 1979 aa1.28□□□□□ -2.2
NUP54-208ENST00000508604 NUP153P49790 1475 aaKnown RBP1.28□□□□□ -2.21
NUP54-208ENST00000508604 PARP14Q460N5 1801 aa1.28□□□□□ -2.21
NUP54-208ENST00000508604 CEP170Q5SW79 1584 aa1.28□□□□□ -2.21
NUP54-208ENST00000508604 NUP210LQ5VU65 1888 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 NEXMIFQ5QGS0 1516 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 DLC1Q96QB1 1528 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 KDM6BO15054 1643 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 IQGAP3Q86VI3 1631 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 MAP3K4Q9Y6R4 1608 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 ARAP2Q8WZ64 1704 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 A0A0A6YYD5 115 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 TRAV19A0A0A6YYK7 116 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 IGHV2-26A0A0B4J1V2 119 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 A0A0D9SFI3 127 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 LOC100130705A0A1B0GUX0 176 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 A0A1B0GW64 132 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 IGLC7A0M8Q6 106 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 TMEM235A6NFC5 223 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 OR4C46A6NHA9 309 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 FAM183AA6NL82 134 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 LRRC30A6NM36 301 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 BBIP1A8MTZ0 92 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 F5H5K5 113 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 H3BTX0 84 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 K7EN84 100 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 GABRPO00591 440 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 NME4O00746 187 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 TAAR5O14804 337 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 CRXO43186 299 aaPredicted RBP1.27□□□□□ -2.21
NUP54-208ENST00000508604 CD5LO43866 347 aa1.27□□□□□ -2.21
NUP54-208ENST00000508604 CREBL2O60519 120 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms