RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CUL9Q8IWT3 2517 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.1□□□□□ -2.23
LSM6-205ENST00000507449 TGIF2-C20orf24A0A0A6YYL0 155 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 CIAO1O76071 339 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 IFNA5P01569 189 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 PPBPP02775 128 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 CALB1P05937 261 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 KRT7P08729 469 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 HLA-DMBP28068 263 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 S100A7P31151 101 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 CSN1S1P47710 185 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 NKX2-5P52952 324 aaPredicted RBP1.1□□□□□ -2.23
LSM6-205ENST00000507449 OR4D2P58180 307 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 GUK1Q16774 197 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 KRTAP21-3Q3LHN1 58 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 TBC1D19Q8N5T2 526 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 C9orf163Q8N9P6 203 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 ACOT12Q8WYK0 555 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 SLC7A6Q92536 515 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 ARL5BQ96KC2 179 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 ERMAPQ96PL5 475 aaPredicted RBP1.1□□□□□ -2.23
LSM6-205ENST00000507449 SPZ1Q9BXG8 430 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 XAGE1AQ9HD64 81 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 CISHQ9NSE2 258 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 DOK5Q9P104 306 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 COL4A1P02462 1669 aa1.1□□□□□ -2.23
LSM6-205ENST00000507449 ADCY9O60503 1353 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 DCCP43146 1447 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 TRGV2A0A075B6R0 118 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 HMSDA8MTL9 139 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 KCNK1O00180 336 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 CREBL2O60519 120 aaPredicted RBP1.09□□□□□ -2.23
LSM6-205ENST00000507449 DCTN3O75935 186 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 SERPINA7P05543 415 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 SRP19P09132 144 aaKnown RBP1.09□□□□□ -2.23
LSM6-205ENST00000507449 FGF6P10767 208 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 UCHL3P15374 230 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 MAGOHP61326 146 aaKnown RBP1.09□□□□□ -2.23
LSM6-205ENST00000507449 PMAIP1Q13794 54 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 FAM27BQ5VT28 67 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 TMEM42Q69YG0 159 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 C8orf74Q6P047 294 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 C1orf158Q8N1D5 194 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 RPP25LQ8N5L8 163 aaKnown RBP1.09□□□□□ -2.23
LSM6-205ENST00000507449 ANKRD7Q92527 254 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 ROPN1LQ96C74 230 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 CNBD2Q96M20 576 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 DOHHQ9BU89 302 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 MRPL32Q9BYC8 188 aaKnown RBP1.09□□□□□ -2.23
LSM6-205ENST00000507449 CHST6Q9GZX3 395 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 CMTM6Q9NX76 183 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 GUCA1BQ9UMX6 200 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 FUT9Q9Y231 359 aa1.09□□□□□ -2.23
LSM6-205ENST00000507449 SCAF11Q99590 1463 aaKnown RBP1.09□□□□□ -2.24
LSM6-205ENST00000507449 FLT4P35916 1363 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 A0A0J9YY10 115 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 A0A1B0GX78 115 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 OR51F1A6NGY5 319 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 EEF1E1-BLOC1S5C9J1V9 151 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 HIST1H1EP10412 219 aaKnown RBP1.08□□□□□ -2.24
LSM6-205ENST00000507449 GPX2P18283 190 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 MSNP26038 577 aaKnown RBP1.08□□□□□ -2.24
LSM6-205ENST00000507449 EMP1P54849 157 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 OR2F1Q13607 317 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 MOGQ16653 247 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 SLC36A1Q7Z2H8 476 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 OR5B17Q8NGF7 314 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 SLC35B4Q969S0 331 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 Q96M85 177 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 PARVGQ9HBI0 331 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 C8orf4Q9NR00 106 aa1.08□□□□□ -2.24
LSM6-205ENST00000507449 RSL24D1Q9UHA3 163 aaKnown RBP1.08□□□□□ -2.24
LSM6-205ENST00000507449 ZFHX2Q9C0A1 2572 aaPredicted RBP1.07□□□□□ -2.24
LSM6-205ENST00000507449 FN1P02751 2386 aaKnown RBP1.07□□□□□ -2.24
LSM6-205ENST00000507449 OR5G3P0C626 314 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 KCNE1P15382 129 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 UBE2IP63279 158 aaKnown RBP1.07□□□□□ -2.24
LSM6-205ENST00000507449 IFITM2Q01629 132 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 CAV1Q03135 178 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 KISS1Q15726 138 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 IMPG1Q17R60 797 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 LPCAT4Q643R3 524 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 PTRHD1Q6GMV3 140 aaKnown RBP1.07□□□□□ -2.24
LSM6-205ENST00000507449 Q6ZSA8 131 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 C7orf65Q6ZTY9 151 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 ZNF676Q8N7Q3 588 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 MRPS26Q9BYN8 205 aaKnown RBP1.07□□□□□ -2.24
LSM6-205ENST00000507449 EFCAB1Q9HAE3 211 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 IL36BQ9NZH7 164 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 KIF24Q5T7B8 1368 aa1.07□□□□□ -2.24
LSM6-205ENST00000507449 IGKV1D-43A0A0B4J1Z2 117 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 GGT3PA6NGU5 568 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 IBA57-AS1B1ANH7 110 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 AHSA1O95433 338 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 IGHV3-7P01780 117 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 MSMBP08118 114 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 SULT1A3P0DMM9 295 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 SULT1A4P0DMN0 295 aa1.06□□□□□ -2.24
LSM6-205ENST00000507449 HIST1H4AP62805 103 aaKnown RBP1.06□□□□□ -2.24
LSM6-205ENST00000507449 SUPT4H1P63272 117 aaKnown RBP1.06□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms