RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 UCK1Q9HA47 277 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 DKKL1Q9UK85 242 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 POLR1DQ9Y2S0 133 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 ABCC11Q96J66 1382 aa1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 SCAF11Q99590 1463 aaKnown RBP1.05□□□□□ -2.24
TOPBP1-204ENST00000505804 HEATR5BQ9P2D3 2071 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 IGKV3D-7A0A0C4DH55 119 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 IGKV3OR2-268A0A0C4DH90 116 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 A0A1B0GW54 56 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 LRRN3E7EW58 273 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 H0Y980 276 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 ORC5O43913 435 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 APOEP02649 317 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 TYMSP04818 313 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 IL3P08700 152 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 CCL5P13501 91 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 ITGB3BPQ13352 177 aaPredicted RBP1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 ARHGAP11BQ3KRB8 267 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 C1orf194Q5T5A4 169 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 C9orf64Q5T6V5 341 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 OGFRL1Q5TC84 451 aaPredicted RBP1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 FAM173BQ6P4H8 233 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 SSX8Q7RTT4 187 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 DCXRQ7Z4W1 244 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 COMMD7Q86VX2 200 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 Q8N402 240 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 SGMS2Q8NHU3 365 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 JOSD2Q8TAC2 188 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 MBD3L1Q8WWY6 194 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 SNAPC4Q5SXM2 1469 aa1.04□□□□□ -2.24
TOPBP1-204ENST00000505804 BAZ2BQ9UIF8 2168 aaKnown RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 IGKV2-40A0A087WW87 121 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 SMIM23A6NLE4 172 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 C21orf140B9A014 251 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 F8W036 122 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 TRAPPC2LH3BP13 241 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 CXCR6O00574 342 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 PFDN6O15212 129 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 SSNA1O43805 119 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 IFNA5P01569 189 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 IGKV2D-40P01614 121 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 CCL1P22362 96 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 MSNP26038 577 aaKnown RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 HAAOP46952 286 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 NKX2-5P52952 324 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 AP2S1P53680 142 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 HIST1H4AP62805 103 aaKnown RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 RSU1Q15404 277 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 IMPG1Q17R60 797 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 RGS21Q2M5E4 152 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 FAM27BQ5VT28 67 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 CD200R1LQ6Q8B3 271 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 C5orf46Q6UWT4 87 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 HIST2H3AQ71DI3 136 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 TMEM86AQ8N2M4 240 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 PIGXQ8TBF5 258 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 ACOT12Q8WYK0 555 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 PTH2Q96A98 100 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 CHST6Q9GZX3 395 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 MAP1LC3AQ9H492 121 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 GPR84Q9NQS5 396 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 FGFR1OP2Q9NVK5 253 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 SOX21Q9Y651 276 aaPredicted RBP1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 PXMP4Q9Y6I8 212 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 C9orf84Q5VXU9 1444 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 GLI3P10071 1580 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 SMARCA4P51532 1647 aa1.03□□□□□ -2.24
TOPBP1-204ENST00000505804 HEATR5AQ86XA9 2040 aa1.03□□□□□ -2.25
TOPBP1-204ENST00000505804 MEIS3P1A6NDR6 274 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 LST1O00453 97 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 LEPROTO15243 131 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TGOLN2O43493 480 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 SERPINA6P08185 405 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TRGC1P0CF51 173 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 G6PCP35575 357 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 RAB13P51153 203 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 CTAG1AP78358 180 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 Q1T7F1 81 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TNFAIP8L3Q5GJ75 292 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 LRRN1Q6UXK5 716 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 C10orf67Q8IYJ2 551 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 SLC22A24Q8N4F4 322 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 RPP25LQ8N5L8 163 aaKnown RBP1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TBC1D19Q8N5T2 526 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TESCQ96BS2 214 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 XAGE1AQ9HD64 81 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 BRWD1Q9NSI6 2320 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 FKBP14Q9NWM8 211 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 TIMM22Q9Y584 194 aa1.02□□□□□ -2.25
TOPBP1-204ENST00000505804 DLG5Q8TDM6 1919 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CCDC88AQ3V6T2 1871 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 MAST2Q6P0Q8 1798 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 OR51F1A6NGY5 319 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 OR4C45A6NMZ5 311 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 M0R036 132 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 ACOX3O15254 700 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 KRT75O95678 551 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 ISG15P05161 165 aa1.01□□□□□ -2.25
TOPBP1-204ENST00000505804 CALB1P05937 261 aa1.01□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms