RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 HIST3H3Q16695 136 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 RGS21Q2M5E4 152 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 OR1L8Q8NGR8 309 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 IMP4Q96G21 291 aaKnown RBP1.29□□□□□ -2.2
CHD1-203ENST00000505657 CNBD2Q96M20 576 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 PPP1R2P1Q96PQ5 205 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 IMMP2LQ96T52 175 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 TXNDC17Q9BRA2 123 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 TTTY12Q9BZ98 90 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 OR51V1Q9H2C8 321 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 AK3Q9UIJ7 227 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 HHLA3Q9XRX5 114 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 FAM215AQ9Y5M1 114 aa1.29□□□□□ -2.2
CHD1-203ENST00000505657 DOCK10Q96BY6 2186 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 A0A0J9YY10 115 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 A0A1B0GV50 99 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 A0A1B0GX78 115 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 CLDN24A6NM45 220 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 TMEM114B3SHH9 223 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 H3BRN7 92 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 J3QQQ9 107 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 PSMD12O00232 456 aaPredicted RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 LEPROTO15243 131 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 CHP2O43745 196 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 KLRC4O43908 158 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 PRB1P04280 392 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 TCRBP04435 133 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 OR5G3P0C626 314 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 ZNF705DP0CH99 300 aaPredicted RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 CD79AP11912 226 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 CD24P25063 80 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 RPL28P46779 137 aaKnown RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 HAAOP46952 286 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 CSN1S1P47710 185 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 OMPP47874 163 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 RPL26P61254 145 aaKnown RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 ERHP84090 104 aaKnown RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 MIAQ16674 131 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 GUK1Q16774 197 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 SYPL2Q5VXT5 272 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 ZNF705AQ6ZN79 300 aaPredicted RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 CLDN22Q8N7P3 220 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 OR5J2Q8NH18 312 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 RNASE11Q8TAA1 199 aaKnown RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 ERMAPQ96PL5 475 aaPredicted RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 Q9BRP9 147 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 NDUFB11Q9NX14 153 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 NAT8Q9UHE5 227 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 RPL26L1Q9UNX3 145 aaKnown RBP1.28□□□□□ -2.2
CHD1-203ENST00000505657 ZFYVE9O95405 1425 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 NUP160Q12769 1436 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 ADGRB3O60242 1522 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 CCDC88CQ9P219 2028 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 FREM1Q5H8C1 2179 aa1.28□□□□□ -2.2
CHD1-203ENST00000505657 FBN3Q75N90 2809 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 MYOFQ9NZM1 2061 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 DCCP43146 1447 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 WRNQ14191 1432 aaPredicted RBP eCLIP1.27□□□□□ -2.21
CHD1-203ENST00000505657 TRAV41A0A0B4J266 112 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 A0A1B0GVG6 124 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 GGT3PA6NGU5 568 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 PPBPP02775 128 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 SRP19P09132 144 aaKnown RBP1.27□□□□□ -2.21
CHD1-203ENST00000505657 UCHL1P09936 223 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 HLA-DMBP28068 263 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 RAP1GDS1P52306 607 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 TPI1P60174 286 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 RANP62826 216 aaKnown RBP1.27□□□□□ -2.21
CHD1-203ENST00000505657 CAV1Q03135 178 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 ZNF90Q03938 601 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 STX5Q13190 355 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 GRK1Q15835 563 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 LRRC28Q86X40 367 aaPredicted RBP1.27□□□□□ -2.21
CHD1-203ENST00000505657 C1orf158Q8N1D5 194 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 ROPN1LQ96C74 230 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 C8orf76Q96K31 380 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.27□□□□□ -2.21
CHD1-203ENST00000505657 CISHQ9NSE2 258 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 TMEM106BQ9NUM4 274 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 VPS29Q9UBQ0 182 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 TIMM22Q9Y584 194 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 RTTNQ86VV8 2226 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 MED12LQ86YW9 2145 aa1.27□□□□□ -2.21
CHD1-203ENST00000505657 CUL9Q8IWT3 2517 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 DENND4BO75064 1496 aaPredicted RBP1.26□□□□□ -2.21
CHD1-203ENST00000505657 FLT4P35916 1363 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 MTUS2Q5JR59 1369 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TRBV20OR9-2A0A075B6H5 130 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TMSB15BA0A087X1C1 80 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 TRAV38-1A0A0B4J264 116 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 A0A0J9YW62 118 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 A0A1B0GW54 56 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 ARRDC5A6NEK1 342 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 SMIM9A6NGZ8 99 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 LY6LH3BQJ8 138 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 CREBL2O60519 120 aaPredicted RBP1.26□□□□□ -2.21
CHD1-203ENST00000505657 KRT75O95678 551 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 LGALS1P09382 135 aaKnown RBP1.26□□□□□ -2.21
CHD1-203ENST00000505657 CCL5P13501 91 aa1.26□□□□□ -2.21
CHD1-203ENST00000505657 RPL5P46777 297 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 290.5 ms