RNA–Protein interactions for RNA: ENST00000505458.5

NFKB1-205, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-205ENST00000505458 CCL3L1P16619 93 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 ERVFRD-1P60508 538 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 CCL20P78556 96 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 ERHP84090 104 aaKnown RBP9.25□□□□□ -0.93
NFKB1-205ENST00000505458 SSX2Q16385 188 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 FAM122CQ6P4D5 195 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 TEPPQ6URK8 271 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 LCN15Q6UWW0 184 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 LYPD2Q6UXB3 125 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 ZCCHC24Q8N2G6 241 aaKnown RBP9.25□□□□□ -0.93
NFKB1-205ENST00000505458 RXFP4Q8TDU9 374 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 NEUROG1Q92886 237 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 ST6GALNAC6Q969X2 333 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 SPTBN2O15020 2390 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 MT-ND4LP03901 98 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 OR13C7P0DN81 318 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 MAS1LP35410 378 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 RPL8P62917 257 aaKnown RBP9.25□□□□□ -0.93
NFKB1-205ENST00000505458 AVPI1Q5T686 147 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 CACNG8Q8WXS5 425 aa9.25□□□□□ -0.93
NFKB1-205ENST00000505458 ICE1Q9Y2F5 2266 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 CEP295Q9C0D2 2601 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 ATXN7O15265 892 aaPredicted RBP9.24□□□□□ -0.93
NFKB1-205ENST00000505458 IGHV3-7P01780 117 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 ZNF726P1Q15940 193 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 C4orf17Q53FE4 359 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 ACSM6Q6P461 480 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 DTX2Q86UW9 622 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 PRRC2CQ9Y520 2896 aaKnown RBP9.24□□□□□ -0.93
NFKB1-205ENST00000505458 A0A1W2PPV4 95 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 SAA1P0DJI8 122 aaPredicted RBP9.24□□□□□ -0.93
NFKB1-205ENST00000505458 LINC00205P59089 165 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 RPP25LQ8N5L8 163 aaKnown RBP9.24□□□□□ -0.93
NFKB1-205ENST00000505458 SLC35E1Q96K37 410 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 RARRES2Q99969 163 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 MLXQ9UH92 298 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 PCNX1Q96RV3 2341 aa9.24□□□□□ -0.93
NFKB1-205ENST00000505458 A0A1B0GV50 99 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 SNRNP70P08621 437 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 GPX4P36969 197 aaPredicted RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 RPL29P47914 159 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 BSXQ3C1V8 233 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 CBLN2Q8IUK8 224 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 VKORC1L1Q8N0U8 176 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 ARL2-SNX15V9GYD0 113 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 H3BQ15 152 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 NUPL2O15504 423 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 COMPP49747 757 aaPredicted RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 MEF2BQ02080 365 aaPredicted RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 TFF3Q07654 80 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 C1orf229Q6ZS94 237 aaPredicted RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 TEX45Q8NA69 505 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 RNF2Q99496 336 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 LSM4Q9Y4Z0 139 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 DIDO1Q9BTC0 2240 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 ZFP92A6NM28 416 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 LIPFP07098 398 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 HNF4GQ14541 408 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 TMEM88Q6PEY1 159 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 RNASEH2CQ8TDP1 164 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 RFNGQ9Y644 331 aa9.23□□□□□ -0.93
NFKB1-205ENST00000505458 YLPM1P49750 1951 aaKnown RBP9.23□□□□□ -0.93
NFKB1-205ENST00000505458 TRAV3A0A0B4J244 114 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 M0R1W7 72 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 TGOLN2O43493 480 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 PLAUP00749 431 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 RPS16P62249 146 aaKnown RBP9.22□□□□□ -0.93
NFKB1-205ENST00000505458 SMUG1Q53HV7 270 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 SPINK9Q5DT21 86 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 C11orf71Q6IPW1 123 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 CYB561D1Q8N8Q1 229 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 VSIRQ9H7M9 311 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 CHODLQ9H9P2 273 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 TMEM242Q9NWH2 141 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 DLL1O00548 723 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 RRHO14718 337 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 F12P00748 615 aaPredicted RBP9.22□□□□□ -0.93
NFKB1-205ENST00000505458 CA2P00918 260 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 RAB5BP61020 215 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 RHOBP62745 196 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 HLA-DRB5Q30154 266 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 TMEM144Q7Z5S9 345 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 PNKDQ8N490 385 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 GGTLC1Q9BX51 225 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 CTDSP1Q9GZU7 261 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 PUS1Q9Y606 427 aaKnown RBP eCLIP9.22□□□□□ -0.93
NFKB1-205ENST00000505458 ANKHD1Q8IWZ3 2542 aaKnown RBP9.22□□□□□ -0.93
NFKB1-205ENST00000505458 SPTA1P02549 2419 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 TEX50A0A1B0GTY4 177 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 MED19A0JLT2 244 aaPredicted RBP9.22□□□□□ -0.93
NFKB1-205ENST00000505458 F6UZH7 168 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 SIAH2O43255 324 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 PDE6DO43924 150 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 C1QTNF9P0C862 333 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 MMD2Q8IY49 270 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 RAB24Q969Q5 203 aa9.22□□□□□ -0.93
NFKB1-205ENST00000505458 PPIAL4CA0A0B4J2A2 164 aa9.21□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms