RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 TMED4Q7Z7H5 227 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 LYG2Q86SG7 212 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF429Q86V71 674 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 FOXRED2Q8IWF2 684 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 POC5Q8NA72 575 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 CHPT1Q8WUD6 406 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 RBPMSQ93062 196 aaKnown RBP3.87□□□□□ -1.79
LMNB1-208ENST00000504788 LSM10Q969L4 123 aaKnown RBP3.87□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF414Q96IQ9 312 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 NOL4LQ96MY1 436 aaPredicted RBP3.87□□□□□ -1.79
LMNB1-208ENST00000504788 SCGB3A2Q96PL1 93 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 OR2A7Q96R45 310 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 TSNAXQ99598 290 aaKnown RBP3.87□□□□□ -1.79
LMNB1-208ENST00000504788 SEC22CQ9BRL7 303 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 NDUFA4L2Q9NRX3 87 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 COA4Q9NYJ1 87 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 SHPKQ9UHJ6 478 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 C14orf166Q9Y224 244 aaKnown RBP3.87□□□□□ -1.79
LMNB1-208ENST00000504788 WNK1Q9H4A3 2382 aa3.87□□□□□ -1.79
LMNB1-208ENST00000504788 C15orf61A6NNL5 157 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 NCBP2LA6PVI3 153 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 INS-IGF2F8WCM5 200 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 G3V318 75 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 ADAP1O75689 374 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 BRI3O95415 125 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 HRASP01112 189 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 RPLP1P05386 114 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 H2AFB2P0C5Z0 115 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 VDAC1P21796 283 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 PSMB8P28062 276 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 WT1-ASQ06250 92 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SRSF4Q08170 494 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 C11orf87Q6NUJ2 197 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SSX9Q7RTT3 188 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SGPP2Q8IWX5 399 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 STPG2Q8N412 459 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 CCDC71LQ8N9Z2 235 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 OR4A5Q8NH83 315 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SGMS2Q8NHU3 365 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 TMEM170AQ8WVE7 144 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 WFDC12Q8WWY7 111 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SRSF12Q8WXF0 261 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 GPR146Q96CH1 333 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 WDR89Q96FK6 387 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 OR10C1Q96KK4 312 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 FAM103A1Q9BTL3 118 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 C19orf24Q9BVV8 132 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 NPFFR1Q9GZQ6 430 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 OR51J1Q9H342 316 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 C11orf1Q9H5F2 150 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 BEX1Q9HBH7 125 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 RAB18Q9NP72 206 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 LINC00527Q9UJ94 153 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 FOXA2Q9Y261 457 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 NSG2Q9Y328 171 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 TRBV9A0A0B4J1U6 114 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 TEX50A0A1B0GTY4 177 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 DUXBA0A1W2PPF3 345 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 CLPSL1A2RUU4 121 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 BTBD17A6NE02 478 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 INMT-MINDY4F8WBC2 141 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 IGHG4P01861 327 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 HLA-AP01891 365 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 CRYGCP07315 174 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SLC25A6P12236 298 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 INPP1P49441 399 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 MFAP2P55001 183 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 RAB25P57735 213 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 RPL8P62917 257 aaKnown RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 CD83Q01151 205 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 AKIRIN2Q53H80 203 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 AWAT1Q58HT5 328 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 TMEM268Q5VZI3 342 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 HIST2H2BDQ6DRA6 164 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 MZT2BQ6NZ67 158 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 C19orf35Q6ZS72 473 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 MMD2Q8IY49 270 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 OR10W1Q8NGF6 305 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF431Q8TF32 576 aaPredicted RBP3.86□□□□□ -1.79
LMNB1-208ENST00000504788 FANCD2OSQ96PS1 177 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 CITED1Q99966 193 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 PRSS22Q9GZN4 317 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 ZNF257Q9Y2Q1 563 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 KCNIP3Q9Y2W7 256 aa3.86□□□□□ -1.79
LMNB1-208ENST00000504788 SNRPGP15A8MWD9 76 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 G3V3Q6 166 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 AP4M1O00189 453 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 ST8SIA3O43173 380 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 TMEM50AO95807 157 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 SERPINE2P07093 398 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 AREGP15514 252 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 CTRB1P17538 263 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 MAS1LP35410 378 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 VDAC2P45880 294 aaPredicted RBP3.85□□□□□ -1.79
LMNB1-208ENST00000504788 H2BFSP57053 126 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 DEFA1P59665 94 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 DEFA3P59666 94 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 PRCDQ00LT1 54 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 ID3Q02535 119 aa3.85□□□□□ -1.79
LMNB1-208ENST00000504788 FXYD3Q14802 87 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms