RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 NPIPB3Q92617 1050 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 MS4A10Q96PG2 267 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 TMEM56-RWDD3S4R434 201 aa11.74□□□□□ -0.53
TCOF1-207ENST00000504761 Q6P435 159 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 Q6ZR03 302 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 Q8WTZ3 238 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 NEU4Q8WWR8 484 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-207ENST00000504761 BTF3L4Q96K17 158 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 NDFIP1Q9BT67 221 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 CBLN4Q9NTU7 201 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 SCGB1D1O95968 90 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 CD55P08174 381 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 ACAA1P09110 424 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-207ENST00000504761 SMIM15Q7Z3B0 74 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-207ENST00000504761 COQ2Q96H96 371 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 SEC11CQ9BY50 192 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 TMEM167BQ9NRX6 74 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 DPM3Q9P2X0 92 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 IGKV1D-17A0A075B6S4 117 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 SERTM2A0A1B0GWG4 89 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 H3BTX0 84 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 FBP1P09467 338 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 MEF2CQ06413 473 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-207ENST00000504761 DHRS7BQ6IAN0 325 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-207ENST00000504761 UNQ5815/PRO19632Q6UWF5 114 aa11.73□□□□□ -0.53
TCOF1-207ENST00000504761 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-207ENST00000504761 YPEL1O60688 119 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 NTF3P20783 257 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 PAX5Q02548 391 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 ARL16Q0P5N6 197 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 YPEL2Q96QA6 119 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 CLEC5AQ9NY25 188 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 CHEK1O14757 476 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 FAM53AQ6NSI3 398 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-207ENST00000504761 GOSR1O95249 250 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 BCL2P10415 239 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 GALR1P47211 349 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 RPL30P62888 115 aaKnown RBP11.72□□□□□ -0.53
TCOF1-207ENST00000504761 CYYR1Q96J86 154 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 C18orf12Q96KH6 178 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 MPZP25189 248 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 ZNF273Q14593 569 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 SSX7Q7RTT5 188 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 MANBALQ9NQG1 85 aa11.72□□□□□ -0.53
TCOF1-207ENST00000504761 RAB4AP20338 218 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 FXYD3Q14802 87 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 M0QZ24 198 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 PPOXP50336 477 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 HERPUD1Q15011 391 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 PUSL1Q8N0Z8 303 aaKnown RBP11.71□□□□□ -0.53
TCOF1-207ENST00000504761 FAM168AQ92567 244 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 P2RX4Q99571 388 aa11.71□□□□□ -0.53
TCOF1-207ENST00000504761 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.53
TCOF1-207ENST00000504761 UNC80Q8N2C7 3258 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 CHD9Q3L8U1 2897 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 E7EQL1 145 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 J3KRW8 73 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 CXorf1O96002 111 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 IGKV1D-33P01593 117 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 IGKV1-33P01594 117 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 DANCRP0C864 163 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 PF4V1P10720 104 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 DUTP33316 252 aaKnown RBP11.71□□□□□ -0.54
TCOF1-207ENST00000504761 WDR86Q86TI4 376 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 ZNF439Q8NDP4 499 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 TMPRSS5Q9H3S3 457 aa11.71□□□□□ -0.54
TCOF1-207ENST00000504761 TRBV23-1A0A0A0MS06 115 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 FOXH1O75593 365 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 STPG2Q8N412 459 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 ST6GALNAC3Q8NDV1 305 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 TMEM131Q92545 1883 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 TMEM178BH3BS89 294 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 HYPMO75409 117 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 NDUFB4O95168 129 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 MOSP00540 346 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 THBDP07204 575 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 CTRB1P17538 263 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 CTRB2Q6GPI1 263 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 RBM14Q96PK6 669 aaKnown RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 DBX1A6NMT0 343 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 GATA2P23769 480 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 CEACAM8P31997 349 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 KHDC3LQ587J8 217 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 ASCL4Q6XD76 172 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 OR5AU1Q8NGC0 362 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 OSR1Q8TAX0 266 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 FAM210BQ96KR6 192 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 NAT8Q9UHE5 227 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 KIAA1324LA8MWY0 1029 aaPredicted RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 CAMPP49913 170 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 TFF3Q07654 80 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 LYPD2Q6UXB3 125 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 ZNF788Q6ZQV5 615 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 SGK494Q96LW2 274 aa11.7□□□□□ -0.54
TCOF1-207ENST00000504761 WDR61Q9GZS3 305 aaKnown RBP11.7□□□□□ -0.54
TCOF1-207ENST00000504761 MFSD2BA6NFX1 497 aa11.69□□□□□ -0.54
TCOF1-207ENST00000504761 C10orf142B7Z368 130 aa11.69□□□□□ -0.54
TCOF1-207ENST00000504761 SAA1P0DJI8 122 aaPredicted RBP11.69□□□□□ -0.54
TCOF1-207ENST00000504761 MDKP21741 143 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms