RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 CXCL3P19876 107 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 RTL8BQ17RB0 113 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 ZNF585BQ52M93 769 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 TEX38Q6PEX7 206 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 DRAXINQ8NBI3 349 aaPredicted RBP14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 KLHL30-AS1Q8NEE0 82 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 NABP2Q9BQ15 211 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 TMED3Q9Y3Q3 217 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 DNAH3Q8TD57 4116 aa14.16□□□□□ -0.14
SQSTM1-209ENST00000504627 H0YJW9 148 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 RAMP3O60896 148 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 FCGR3BO75015 233 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 IFNA21P01568 189 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 GIPP09681 153 aaPredicted RBP14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 OR2B11Q5JQS5 317 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 C8orf86Q6ZUL3 223 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 MRPL41Q8IXM3 137 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 SELENOHQ8IZQ5 122 aaKnown RBP14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 SLC35G3Q8N808 338 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 LINC00482Q8N8I6 264 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 OR5AN1Q8NGI8 311 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 PLEKHA2Q9HB19 425 aa14.15□□□□□ -0.14
SQSTM1-209ENST00000504627 CCNKO75909 580 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 HPRT1P00492 218 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 VDAC1P21796 283 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 BRWD1-AS2P59051 145 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 GSG1LQ6UXU4 331 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 PDPNQ86YL7 162 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 DPF1Q92782 380 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 LSM10Q969L4 123 aaKnown RBP14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 SPIN2AQ99865 258 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 SPIN2BQ9BPZ2 258 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 NEURL2Q9BR09 285 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 GPR61Q9BZJ8 451 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 ZNF436Q9C0F3 470 aaPredicted RBP14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 PLSCR3Q9NRY6 295 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 SLC35D1Q9NTN3 355 aa14.14□□□□□ -0.15
SQSTM1-209ENST00000504627 CCSO14618 274 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 ADAP1O75689 374 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 OR2A4O95047 310 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 S1PR2O95136 353 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 IGKV1-39P01597 117 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 IGKV1D-39P04432 117 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 HOXB5P09067 269 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 MC5RP33032 325 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 MYCNOSP40205 109 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 LPAR6P43657 344 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 AKR1C2P52895 323 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 F2RL1P55085 397 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 H2BFSP57053 126 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 LINC00205P59089 165 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 MMDQ15546 238 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 CXorf66Q5JRM2 361 aaPredicted RBP14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 GGNBP1Q5YKI7 109 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 ETV3LQ6ZN32 361 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 C18orf65Q6ZTR6 163 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 TCTE3Q8IZS6 198 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 RBMXL1Q96E39 390 aaKnown RBP14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 ST6GAL2Q96JF0 529 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 OR2A7Q96R45 310 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 WASHC3Q9Y3C0 194 aa14.13□□□□□ -0.15
SQSTM1-209ENST00000504627 RAP2BP61225 183 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 NMSQ5H8A3 153 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 LYZL2Q7Z4W2 148 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 FAM219AQ8IW50 185 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 FAM71E2Q8N5Q1 922 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 RNASE11Q8TAA1 199 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 HSPB9Q9BQS6 159 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 PDCD10Q9BUL8 212 aa14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 MCRIP2Q9BUT9 160 aaKnown RBP14.12□□□□□ -0.15
SQSTM1-209ENST00000504627 C5orf51A6NDU8 294 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 FAM25EA8MYX2 175 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 CRYZL1O95825 349 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 RPLP1P05386 114 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 SLC25A6P12236 298 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 NQO2P16083 231 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 HOXD3P31249 432 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 ERVK-16P61578 105 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 CYCSP99999 105 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 POU2AF1Q16633 256 aa14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 OSR1Q8TAX0 266 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 RRNAD1Q96FB5 475 aaKnown RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 RANGRFQ9HD47 186 aaPredicted RBP14.11□□□□□ -0.15
SQSTM1-209ENST00000504627 MARCH11A6NNE9 402 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 SIX6O95475 246 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 IGKV1-5P01602 117 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 ELANEP08246 267 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 P0C879 139 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 FOXE3Q13461 319 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 TMEM177Q53S58 311 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 DEFB121Q5J5C9 76 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 THOC7Q6I9Y2 204 aaKnown RBP14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 PPP1R14BQ96C90 147 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 SEC22AQ96IW7 307 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 C2orf50Q96LR7 162 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 DUX3Q96PT4 197 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 AIFM2Q9BRQ8 373 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 NMES1Q9C002 83 aa14.1□□□□□ -0.15
SQSTM1-209ENST00000504627 H7C2Y5 167 aa14.09□□□□□ -0.15
SQSTM1-209ENST00000504627 HRASP01112 189 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms