RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 UBAC2Q8NBM4 344 aa8.79□□□□□ -1
LSM6-204ENST00000504181 ADTRPQ96IZ2 230 aa8.79□□□□□ -1
LSM6-204ENST00000504181 MYCBPQ99417 103 aaPredicted RBP8.79□□□□□ -1
LSM6-204ENST00000504181 Q9N2K0 584 aa8.79□□□□□ -1
LSM6-204ENST00000504181 AK3Q9UIJ7 227 aa8.79□□□□□ -1
LSM6-204ENST00000504181 CGB1A6NKQ9 187 aa8.78□□□□□ -1
LSM6-204ENST00000504181 BET1O15155 118 aa8.78□□□□□ -1
LSM6-204ENST00000504181 NUPL2O15504 423 aaKnown RBP8.78□□□□□ -1
LSM6-204ENST00000504181 CRHBPP24387 322 aa8.78□□□□□ -1
LSM6-204ENST00000504181 MAS1LP35410 378 aa8.78□□□□□ -1
LSM6-204ENST00000504181 ARFRP1Q13795 201 aa8.78□□□□□ -1
LSM6-204ENST00000504181 FAM222AQ5U5X8 452 aa8.78□□□□□ -1
LSM6-204ENST00000504181 UBE2UQ5VVX9 321 aa8.78□□□□□ -1
LSM6-204ENST00000504181 ARHGAP24Q8N264 748 aa8.78□□□□□ -1
LSM6-204ENST00000504181 VN1R17PQ8TDU5 208 aa8.78□□□□□ -1
LSM6-204ENST00000504181 ZNF414Q96IQ9 312 aa8.78□□□□□ -1
LSM6-204ENST00000504181 CIB1Q99828 191 aa8.78□□□□□ -1
LSM6-204ENST00000504181 RIMS4Q9H426 269 aaPredicted RBP8.78□□□□□ -1
LSM6-204ENST00000504181 PLEKHJ1Q9NW61 149 aa8.78□□□□□ -1
LSM6-204ENST00000504181 ERVK13-1Q9NX77 482 aa8.78□□□□□ -1
LSM6-204ENST00000504181 THYN1Q9P016 225 aa8.78□□□□□ -1
LSM6-204ENST00000504181 DKK2Q9UBU2 259 aa8.78□□□□□ -1
LSM6-204ENST00000504181 RABAC1Q9UI14 185 aa8.78□□□□□ -1
LSM6-204ENST00000504181 MGAT4AQ9UM21 535 aa8.78□□□□□ -1
LSM6-204ENST00000504181 RBM7Q9Y580 266 aaKnown RBP8.78□□□□□ -1
LSM6-204ENST00000504181 A0A1W2PPK0 400 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 AQP12BA6NM10 295 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 RPL11P62913 178 aaKnown RBP8.77□□□□□ -1.01
LSM6-204ENST00000504181 ATP6AP1Q15904 470 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 ACTL10Q5JWF8 245 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 AQP12AQ8IXF9 295 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 TMEM167AQ8TBQ9 72 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 KCNK15Q9H427 330 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 XCL2Q9UBD3 114 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 LINC00588Q9Y4M8 146 aa8.77□□□□□ -1.01
LSM6-204ENST00000504181 TMEM189A5PLL7 270 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 ST8SIA3O43173 380 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 YIF1AO95070 293 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 SRMP19623 302 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 RPL22L1Q6P5R6 122 aaKnown RBP8.76□□□□□ -1.01
LSM6-204ENST00000504181 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 PUSL1Q8N0Z8 303 aaKnown RBP8.76□□□□□ -1.01
LSM6-204ENST00000504181 VSTM2AQ8TAG5 236 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 ST8SIA2Q92186 375 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 GGHQ92820 318 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 SRSF8Q9BRL6 282 aaKnown RBP8.76□□□□□ -1.01
LSM6-204ENST00000504181 TMEM59Q9BXS4 323 aa8.76□□□□□ -1.01
LSM6-204ENST00000504181 TRAV14DV4A0A0A6YYC5 116 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 IGHV3-66A0A0C4DH42 116 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 TRBV5-5A0A0J9YX44 114 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 TEX48A0A1B0GUV7 120 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 RPS10-NUDT3A0A1W2PQS6 291 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 TRDCB7Z8K6 153 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 G3V2T6 193 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 NUDT3O95989 172 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 IFNA5P01569 189 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 EIF4EP06730 217 aaKnown RBP8.75□□□□□ -1.01
LSM6-204ENST00000504181 ZNF688P0C7X2 276 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 HOXB6P17509 224 aaKnown RBP8.75□□□□□ -1.01
LSM6-204ENST00000504181 SERPINB10P48595 397 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 CCL18P55774 89 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 Q56UQ5 140 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 IGSF11Q5DX21 431 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 TTC32Q5I0X7 151 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 CDPF1Q6NVV7 123 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 KCTD9Q7L273 389 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 CDH26Q8IXH8 852 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 LILRB2Q8N423 598 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 OR10C1Q96KK4 312 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 C21orf62Q9NYP8 219 aa8.75□□□□□ -1.01
LSM6-204ENST00000504181 IGHV3OR16-12A0A075B7B8 117 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 A0A0A6YYD4 124 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 TRAV2A0A0B4J234 112 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 IGLC7A0M8Q6 106 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 DCTN3O75935 186 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 APOHP02749 345 aaPredicted RBP8.74□□□□□ -1.01
LSM6-204ENST00000504181 OR2B8PP59922 312 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 RPL8P62917 257 aaKnown RBP8.74□□□□□ -1.01
LSM6-204ENST00000504181 Q499Y3 187 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 GSG1LQ6UXU4 331 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 OR4A4PQ8NGN8 299 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 OR10J5Q8NHC4 309 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 DGCR14Q96DF8 476 aaKnown RBP8.74□□□□□ -1.01
LSM6-204ENST00000504181 C1QTNF4Q9BXJ3 329 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 GABARAPL3Q9BY60 117 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 Q9H8V8 135 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 C12orf4Q9NQ89 552 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 GHRLQ9UBU3 117 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 FAT3Q8TDW7 4589 aa8.74□□□□□ -1.01
LSM6-204ENST00000504181 SOCS1O15524 211 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 CD5P06127 495 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 GNB3P16520 340 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 HLA-GP17693 338 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 OXA1LQ15070 435 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 CCDC58Q4VC31 144 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 SLC25A24Q6NUK1 477 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 DUSP18Q8NEJ0 188 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 STXBP6Q8NFX7 210 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 SCARB1Q8WTV0 552 aa8.73□□□□□ -1.01
LSM6-204ENST00000504181 TRUB1Q8WWH5 349 aaKnown RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms