RNA–Protein interactions for RNA: ENST00000504015.2

ALYREF-201, Transcript of Aly/REF export factor, humanhuman

TSL 3

Gene ALYREF, Length 254 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALYREF-201ENST00000504015 HIST1H2BHQ93079 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 ZDHHC16Q969W1 377 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RPUSD4Q96CM3 377 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SLC35E1Q96K37 410 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RHOVQ96L33 236 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RNF2Q99496 336 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BNQ99877 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H2BMQ99879 126 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 GGTLC1Q9BX51 225 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 GAL3ST2Q9H3Q3 398 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SLC25A22Q9H936 323 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 GCM1Q9NP62 436 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 NGBQ9NPG2 151 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM167BQ9NRX6 74 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM140Q9NV12 185 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 BET1LQ9NYM9 111 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SLC25A10Q9UBX3 287 aaPredicted RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 MIOXQ9UGB7 285 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 RPUSD1Q9UJJ7 312 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 FZR1Q9UM11 496 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SLC45A2Q9UMX9 530 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TCF19Q9Y242 345 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 TP53TG5Q9Y2B4 290 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 LSM4Q9Y4Z0 139 aaKnown RBP3.21□□□□□ -1.9
ALYREF-201ENST00000504015 FAM215AQ9Y5M1 114 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 LINC00312Q9Y6C7 94 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 PXMP4Q9Y6I8 212 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 URGCP-MRPS24S4R325 110 aa3.21□□□□□ -1.9
ALYREF-201ENST00000504015 SDK1Q7Z5N4 2213 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 RELNP78509 3460 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PTPRBP23467 1997 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 WDFY3Q8IZQ1 3526 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 IGHV3-64DA0A0J9YX35 117 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 DEFB108AA8MXU0 73 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 C9JCJ5 164 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 C16orf97H3BN30 126 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MKRN2OSH3BPM6 223 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 J3QR06 171 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 UPK2O00526 184 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 DVL1O14640 695 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 RRHO14718 337 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 SPRY3O43610 288 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 GATCO43716 136 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 YIF1AO95070 293 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 IGHV1-46P01743 117 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 APOA2P02652 100 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 HIST1H1BP16401 226 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 USF1P22415 310 aaPredicted RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 CCKARP32238 428 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MC5RP33032 325 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 GPX4P36969 197 aaPredicted RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF134P52741 427 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 TAS2R45P59539 299 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRR20EP86478 221 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRR20CP86479 221 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRR20DP86480 221 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRR20BP86481 221 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRR20AP86496 221 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PRCDQ00LT1 54 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MSMPQ1L6U9 139 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 COX19Q49B96 90 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 C2orf83Q53S99 150 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 NCMAPQ5T1S8 102 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 SPNS3Q6ZMD2 512 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PQLC2Q6ZP29 291 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 SLC25A48Q6ZT89 311 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF833PQ6ZTB9 187 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 SLC16A13Q7RTY0 426 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 C16orf82Q7Z2V1 217 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM144Q7Z5S9 345 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 LINC01551Q86U37 167 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MRPL41Q8IXM3 137 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM183AQ8IXX5 376 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 ABHD12Q8N2K0 398 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 LINC00311Q8N616 119 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 RBMXL3Q8N7X1 1067 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 OR1L8Q8NGR8 309 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 OR4X1Q8NH49 305 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 VSTM2AQ8TAG5 236 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 ZNF596Q8TC21 504 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 TMEM170AQ8WVE7 144 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 FRZBQ92765 325 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 NEUROG1Q92886 237 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 C11orf52Q96A22 123 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 GAFA1Q96PS6 74 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 UHRF2Q96PU4 802 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PFDN5Q99471 154 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MGST2Q99735 147 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 DCTN5Q9BTE1 182 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MRPL32Q9BYC8 188 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 MS4A5Q9H3V2 200 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 PLEKHA3Q9HB20 300 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 TECRQ9NZ01 308 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 JKAMPQ9P055 326 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 CHD3Q12873 2000 aaKnown RBP3.2□□□□□ -1.9
ALYREF-201ENST00000504015 DOCK7Q96N67 2140 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 FBN2P35556 2912 aa3.2□□□□□ -1.9
ALYREF-201ENST00000504015 ZZEF1O43149 2961 aa3.19□□□□□ -1.9
ALYREF-201ENST00000504015 FRYQ5TBA9 3013 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms